Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 666 a.a., DNA primase (EC 2.7.7.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  370 bits (950), Expect = e-106
 Identities = 200/423 (47%), Positives = 275/423 (65%), Gaps = 16/423 (3%)

Query: 5   IPRSFIDDLLARLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYHCFGC 64
           IP++FI +LL R+D+VDV+   V+LKK G N    CPFH EK+PSFSVS  KQFYHCFGC
Sbjct: 3   IPQTFIQELLNRVDVVDVVGRYVQLKKGGANLMGLCPFHGEKSPSFSVSPTKQFYHCFGC 62

Query: 65  GAHGNAIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDKRSLY 124
           GA+GNAI F+ME+  M F EA+++LA   G+++  ++ +P     +   A + + + +L 
Sbjct: 63  GANGNAIGFLMEHAGMSFIEAVKDLAQQAGMQIPEDDASPQD---RERAAQQRQKQATLN 119

Query: 125 DLMGSIAQFYRQQLKVPANKHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVRRNFGQQRS 184
           D++   A  Y +QLK   +  AI+YLK RGLSG+I + FG+GY  + W  +   F   + 
Sbjct: 120 DVLEKAAHAYAKQLKT--SPRAIDYLKGRGLSGQIAKTFGLGYAPEGWRALASVFPDYQ- 176

Query: 185 SEDMLVTAGMLIENDN-------GRRYDRFRGRVMFPIRDRRGRVIGFGGRITEQGTPKY 237
            E +LV +GM+IE+++        +RYDRFR R+MFPIR+ +G  IGFGGR+ ++G PKY
Sbjct: 177 -EPLLVESGMVIEHEDEKGADGQAKRYDRFRDRIMFPIRNVKGEHIGFGGRVLDKGEPKY 235

Query: 238 LNSPETPIFHKGKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTSTT 297
           LNSPETP+F KG+ELYGL+E   A R     LV EGYMDVVALAQ G   +VA+LGT+ T
Sbjct: 236 LNSPETPVFSKGRELYGLFEARTAIRVAGYALVTEGYMDVVALAQLGFANAVATLGTACT 295

Query: 298 GDHLQLLFRQTNHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSYV 357
            DH+Q L R T+ V+  +DGD AGR AA +AL+ AL        +KFLFLP   DPDS++
Sbjct: 296 PDHVQKLLRFTDSVVFSFDGDGAGRRAARKALDAALPLATDTRSVKFLFLPAEHDPDSFI 355

Query: 358 RKYGKADFEQQVANATPLSQYLFENLIELHQINLGSHEGKSALRAVATPLIDKIPDPFLQ 417
           R  G+A F Q V  A PLS++L E+       +L S EG++ + + A PL   +PD  L+
Sbjct: 356 RANGEAAFAQCVKEAVPLSRFLLESAGA--DCDLTSAEGRARMASQARPLWSALPDGALK 413

Query: 418 EIL 420
             L
Sbjct: 414 RQL 416