Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 581 a.a., DNA primase (EC 2.7.7.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  608 bits (1569), Expect = e-178
 Identities = 315/585 (53%), Positives = 409/585 (69%), Gaps = 16/585 (2%)

Query: 1   MAGHIPRSFIDDLLARLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYH 60
           MAG IPR FI+DLLAR DIVD+ID RVKLKK+GKNY ACCPFHNEKTPSF+V+ EKQFYH
Sbjct: 1   MAGRIPRVFINDLLARTDIVDLIDVRVKLKKQGKNYHACCPFHNEKTPSFTVNGEKQFYH 60

Query: 61  CFGCGAHGNAIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDK 120
           CFGCGAHGNAIDF+M Y+++EF E +EELA+   LE+  E  T  S        ++   +
Sbjct: 61  CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEIPYEAGTGLSQ-------IERHQR 113

Query: 121 RSLYDLMGSIAQFYRQQLKVPANKHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVRRNFG 180
           ++LY LM  +  FY+Q L  PA K A +YL+ RGLS EI+Q+F IG+    WD   + FG
Sbjct: 114 QNLYQLMNGLNDFYQQSLTHPAAKPARDYLQKRGLSAEIIQRFAIGFAPPGWDNALKRFG 173

Query: 181 QQRSSEDMLVTAGMLIENDNGRRYDRFRGRVMFPIRDRRGRVIGFGGRITEQGTPKYLNS 240
               ++ +L+ AGML+ N+ G  YDRFR RVMFPIRD+RGRVIGFGGR+    TPKYLNS
Sbjct: 174 NNSDNKALLLDAGMLVNNEQGSTYDRFRNRVMFPIRDKRGRVIGFGGRVLGNDTPKYLNS 233

Query: 241 PETPIFHKGKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTSTTGDH 300
           PET IFHKG++LYGLYE  Q   EP ++LVVEGYMDVVALAQY ++Y+VASLGTSTT DH
Sbjct: 234 PETDIFHKGRQLYGLYEAQQYSAEPQRLLVVEGYMDVVALAQYDINYAVASLGTSTTADH 293

Query: 301 LQLLFRQTNHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSYVRKY 360
           + +LFR TN+VICCYDGDRAGRDAAWRALE A+ Y+  G  ++F+FLPDGEDPD+ VRK 
Sbjct: 294 MHMLFRATNNVICCYDGDRAGRDAAWRALETAMPYMTDGRQVRFMFLPDGEDPDTLVRKE 353

Query: 361 GKADFEQQVANATPLSQYLFENLIELHQINLGSHEGKSALRAVATPLIDKIPDPFLQEIL 420
           GKA FE ++  A PLS +LF +L  L Q++L S +G + L A+A PLI+++P    +  L
Sbjct: 354 GKAAFEARMEQAQPLSTFLFNSL--LPQVDLSSPDGSTQLAALALPLINQVPGDAHRIQL 411

Query: 421 EKLLDERTGF--DHQLRR---KKARKTENRPAPHKAIKRTPMRDVIALLIQNPSYAELVP 475
            + L  + G   D QL R   K+A    +RPAP   +KRT MR +I LL+QNP  A LVP
Sbjct: 412 RQTLGLKLGIFDDSQLDRLVPKQAESGVSRPAPQ--LKRTTMRILIGLLVQNPDLAPLVP 469

Query: 476 DLASVRHLMIPGLDTFSEVLEKCRQYPHITTGQLLEHWRDSKNETLLSRLASWEIPLVED 535
            L ++    +PGL  F E+++ C   P +TTGQLLE +R + +   L +L+ W+    + 
Sbjct: 470 PLDALDQNKLPGLGLFKELVKTCLAQPGLTTGQLLELYRGTNDAATLEKLSMWDDIADKA 529

Query: 536 NQEELFLDSLDKILAQCVEKQIENLQAKERSVGLSTEEKRELQDL 580
             E+ F DSL+ +    ++ + E L A++R+ GLS+EE+REL  L
Sbjct: 530 IAEKTFTDSLNHMFDSLLQLRQEELIARDRTHGLSSEERRELWTL 574