Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 581 a.a., DNA primase from Erwinia amylovora T8

 Score =  610 bits (1573), Expect = e-179
 Identities = 316/583 (54%), Positives = 402/583 (68%), Gaps = 12/583 (2%)

Query: 1   MAGHIPRSFIDDLLARLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYH 60
           MAG IPR FI+DLLAR DIVD+IDARVKLKK+GKNY ACCPFHNEKTPSF+V+ EKQFYH
Sbjct: 1   MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNYHACCPFHNEKTPSFTVNGEKQFYH 60

Query: 61  CFGCGAHGNAIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDK 120
           CFGCGAHGNAIDF+M Y+R+EF E+IEELA+  GLEV  E  +  S   ++        +
Sbjct: 61  CFGCGAHGNAIDFLMNYDRLEFVESIEELATLYGLEVPYESGSGPSQLERH-------QR 113

Query: 121 RSLYDLMGSIAQFYRQQLKVPANKHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVRRNFG 180
           +SLY LM  +  F++Q L    +  A +YL  RGLS E+V+ F IG+    WD   + FG
Sbjct: 114 QSLYQLMTGLRDFFQQSLTQGPSAGARDYLAQRGLSDEVVKHFSIGFAPAGWDNALKRFG 173

Query: 181 QQRSSEDMLVTAGMLIENDNGRRYDRFRGRVMFPIRDRRGRVIGFGGRITEQGTPKYLNS 240
                   L+ AGML+ ND GR YDRFR RVMFPI D+RGRVIGFGGR+   G PKYLNS
Sbjct: 174 SNPDDRQSLIDAGMLVTNDQGRSYDRFRERVMFPIHDKRGRVIGFGGRVLGDGMPKYLNS 233

Query: 241 PETPIFHKGKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTSTTGDH 300
           PET IFHKG++LYGLYE L+ Y EP ++LVVEGYMDVVALAQ+GVDY+VASLGTSTT +H
Sbjct: 234 PETEIFHKGRQLYGLYEALKNYPEPGKLLVVEGYMDVVALAQFGVDYAVASLGTSTTAEH 293

Query: 301 LQLLFRQTNHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSYVRKY 360
           +QLLFR T+ VICCYDGDRAGR+AAWRALE AL Y+  G  L+F+FLPDGEDPD+ VRK 
Sbjct: 294 IQLLFRSTDTVICCYDGDRAGREAAWRALETALPYMNDGRQLRFMFLPDGEDPDTLVRKE 353

Query: 361 GKADFEQQVANATPLSQYLFENLIELHQINLGSHEGKSALRAVATPLIDKIPDPFLQEIL 420
           GK  FE ++  A PLS +LF+ L  + Q++L S +G++ L  +A PLI ++P   L+  L
Sbjct: 354 GKEAFEARMEQAMPLSTFLFDTL--MPQVDLRSPDGRAQLSTLALPLISQVPGETLRIYL 411

Query: 421 EKLLDERTGF--DHQLRRKKARKTENRPA-PHKAIKRTPMRDVIALLIQNPSYAELVPDL 477
            + L  + G   D QL +   R+ E+  A     +KRT MR +I LLIQNP  A +VP L
Sbjct: 412 RQELGNKLGILDDSQLDKLLPRQAESAKAVAQPQLKRTTMRILIGLLIQNPQLATIVPPL 471

Query: 478 ASVRHLMIPGLDTFSEVLEKCRQYPHITTGQLLEHWRDSKNETLLSRLASWEIPLVEDNQ 537
             +     PG   F E++  C  +P +TTGQLLE +R +K    L  LA+W   +V+D  
Sbjct: 472 DGLEQSETPGFPLFVELVSTCVAHPGLTTGQLLELYRGTKFSQSLETLATWNHMIVDDEV 531

Query: 538 EELFLDSLDKILAQCVEKQIENLQAKERSVGLSTEEKRELQDL 580
           E +F D+L  +    +E+++E L A +R+ GL+ EE+REL  L
Sbjct: 532 ETMFQDALASMYNNALERRLEELIAHDRTHGLNAEERRELWTL 574