Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 581 a.a., DNA primase from Escherichia coli ECRC62

 Score =  615 bits (1586), Expect = e-180
 Identities = 318/585 (54%), Positives = 406/585 (69%), Gaps = 16/585 (2%)

Query: 1   MAGHIPRSFIDDLLARLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYH 60
           MAG IPR FI+DLLAR DIVD+IDARVKLKK+GKN+ ACCPFHNEKTPSF+V+ EKQFYH
Sbjct: 1   MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60

Query: 61  CFGCGAHGNAIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDK 120
           CFGCGAHGNAIDF+M Y+++EF E +EELA+   LEV  E  +  S        ++   +
Sbjct: 61  CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQ-------IERHQR 113

Query: 121 RSLYDLMGSIAQFYRQQLKVPANKHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVRRNFG 180
           ++LY LM  +  FY+Q L+ P    A +YL+ RGLS E++ +F IG+    WD V + FG
Sbjct: 114 QTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFG 173

Query: 181 QQRSSEDMLVTAGMLIENDNGRRYDRFRGRVMFPIRDRRGRVIGFGGRITEQGTPKYLNS 240
               +   L+ AGML+ ND GR YDRFR RVMFPIRD+RGRVIGFGGR+    TPKYLNS
Sbjct: 174 GNPENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNS 233

Query: 241 PETPIFHKGKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTSTTGDH 300
           PET IFHKG++LYGLYE  Q   EP ++LVVEGYMDVVALAQYG++Y+VASLGTSTT DH
Sbjct: 234 PETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADH 293

Query: 301 LQLLFRQTNHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSYVRKY 360
           +QLLFR TN+VICCYDGDRAGRDAAWRALE AL Y+  G  L+F+FLPDGEDPD+ VRK 
Sbjct: 294 IQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKE 353

Query: 361 GKADFEQQVANATPLSQYLFENLIELHQINLGSHEGKSALRAVATPLIDKIPDPFLQEIL 420
           GK  FE ++  A PLS +LF +L  + Q++L + +G++ L  +A PLI ++P   L+  L
Sbjct: 354 GKEAFEARMEQAMPLSAFLFNSL--MPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL 411

Query: 421 EKLLDERTGF--DHQLRR---KKARKTENRPAPHKAIKRTPMRDVIALLIQNPSYAELVP 475
            + L  + G   D QL R   K A    +RP P   +KRT MR +I LL+QNP  A LVP
Sbjct: 412 RQELGNKLGILDDSQLERLMPKAAESGVSRPVPQ--LKRTTMRILIGLLVQNPELATLVP 469

Query: 476 DLASVRHLMIPGLDTFSEVLEKCRQYPHITTGQLLEHWRDSKNETLLSRLASWEIPLVED 535
            L ++    +PGL  F E++  C   P +TTGQLLEH+R + N   L +L+ W+    ++
Sbjct: 470 PLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKN 529

Query: 536 NQEELFLDSLDKILAQCVEKQIENLQAKERSVGLSTEEKRELQDL 580
             E+ F DSL+ +    +E + E L A+ER+ GLS EE+ EL  L
Sbjct: 530 IAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTL 574