Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 584 a.a., DNA primase from Dickeya dianthicola ME23

 Score =  597 bits (1539), Expect = e-175
 Identities = 311/589 (52%), Positives = 410/589 (69%), Gaps = 18/589 (3%)

Query: 1   MAGHIPRSFIDDLLARLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYH 60
           MAG IPR FI+DLLAR DI+D+IDARVKLKK+GKNY ACCPFH+EKTPSF+V+ +KQFYH
Sbjct: 1   MAGRIPRVFINDLLARTDIIDLIDARVKLKKQGKNYHACCPFHHEKTPSFTVNGDKQFYH 60

Query: 61  CFGCGAHGNAIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDK 120
           CFGCGAHGNAIDF+M Y+R+EF E+IEELA+   L+V  E  T  +   ++        +
Sbjct: 61  CFGCGAHGNAIDFLMNYDRLEFVESIEELAAMHSLDVPYEAGTGPTQLERH-------QR 113

Query: 121 RSLYDLMGSIAQFYRQQLKVPANKHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVRRNFG 180
           +SLY+LM  ++ FY+  L  PA   A EYL  RGLS E++++F IG     WD   + FG
Sbjct: 114 QSLYELMEQLSAFYQHTLNQPAGTPAREYLSRRGLSDEVIRQFAIGCTPPGWDNALKRFG 173

Query: 181 QQRSSEDMLVTAGMLIENDNGRRYDRFRGRVMFPIRDRRGRVIGFGGRITEQGTPKYLNS 240
           +   +   L  AGML+ N+NGR YDRFR RVMFPIRD+RGRVI FGGR+  +G PKYLNS
Sbjct: 174 RSSENRTTLTDAGMLVTNENGRTYDRFRDRVMFPIRDKRGRVIAFGGRVMGEGMPKYLNS 233

Query: 241 PETPIFHKGKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTSTTGDH 300
           PET IFHKG++LYGLYE  Q   E  ++LVVEGYMDVVALAQ+G+DY+VASLGTSTT DH
Sbjct: 234 PETEIFHKGRQLYGLYEAQQKNPELKRLLVVEGYMDVVALAQFGIDYAVASLGTSTTADH 293

Query: 301 LQLLFRQTNHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSYVRKY 360
           +QLLFR T+ V+CCYDGDRAGRDAAWRALE AL YL  G  L+F+FLPDGEDPD+ VR+ 
Sbjct: 294 IQLLFRATDQVVCCYDGDRAGRDAAWRALETALPYLDDGRQLRFMFLPDGEDPDTLVRQE 353

Query: 361 GKADFEQQVANATPLSQYLFENLIELHQINLGSHEGKSALRAVATPLIDKIPDPFLQEIL 420
           GKA FEQ++  A PLS +LF++L  L Q+++ + +G++ L  +A PLI ++P   L+  L
Sbjct: 354 GKAAFEQRIEQAMPLSAFLFDSL--LQQVDMSTPDGRTKLSTLALPLIGQVPGETLRLYL 411

Query: 421 EKLLDERTGF--DHQLRR---KKARKTENRPAPHKAIKRTPMRDVIALLIQNPSYAELVP 475
            + L  + G   D QL R   K A +T +   P   +K T MR +I LL+QNP  +  VP
Sbjct: 412 RQQLGNKLGLLDDSQLDRLLPKAAEQTSSYQPPR--LKVTTMRILIGLLVQNPRLSFEVP 469

Query: 476 DLA--SVRHLMIPGLDTFSEVLEKCRQYPHITTGQLLEHWRDSKNETLLSRLASWEIPLV 533
           +LA   V    + GL+ F ++++ C + P +  G LLE +R+SK    L  LA+W+  + 
Sbjct: 470 ELALDGVEENKVAGLELFLDLVKTCNESPGMNMGLLLEKYRESKYRKQLETLAAWDHMIE 529

Query: 534 EDNQEELFLDSLDKILAQCVEKQIENLQAKERSVGLSTEEKRELQDLIL 582
           E+  EE F  SL ++  Q ++ +++ L A+ER+ GLST E++EL  L L
Sbjct: 530 EEELEEKFRVSLTELYDQLLQLRMDTLIARERTHGLSTNERKELWSLQL 578