Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 649 a.a., DNA primase, catalytic core from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  276 bits (706), Expect = 2e-78
 Identities = 164/416 (39%), Positives = 236/416 (56%), Gaps = 23/416 (5%)

Query: 16  RLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYHCFGCGAHGNAIDFVM 75
           R+DI +V++  V LKKKG+N  ACCPFHNEK+PSFSVS  KQ Y CFGCGA G+A+ FVM
Sbjct: 14  RVDIEEVVNDYVSLKKKGQNLWACCPFHNEKSPSFSVSPAKQIYKCFGCGAAGDALKFVM 73

Query: 76  EYERMEFPEAIEELASTIGLEVQREE-RTPSSPFAKNTPAVKSEDKRSLYDLMGSIAQFY 134
           + E + F EAI+ LA   G+E++ E+  TP    A N       ++ SLY + G     +
Sbjct: 74  DIEGIGFNEAIKHLAQKYGIEIEEEKAATPEEVQAYN-------ERESLYIVQGFARDHF 126

Query: 135 RQQL--KVPANKHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVRRNFGQQRSSEDMLVTA 192
            + L          + Y K RG +   ++KF +GY  D WD + +       S+D+L+  
Sbjct: 127 SKNLLESDEGKSVGLSYFKERGFNLSTIEKFDLGYAMDSWDHLHQAAHTAGHSDDILLKG 186

Query: 193 GMLI--ENDNGRRYDRFRGRVMFPIRDRRGRVIGFGGRI--TEQGTPKYLNSPETPIFHK 248
           G+++  E D  R+YDRFRGRV+F I +  G+ I FG RI   ++  PKY+NSPET I+HK
Sbjct: 187 GLILQKEGDPSRKYDRFRGRVVFTIHNLAGKPIAFGARILTNDKKQPKYINSPETAIYHK 246

Query: 249 GKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTSTTGDHLQLLFRQT 308
              LYG+Y+  QA R      +VEGY DV+++   G++  VAS GTS T   ++L+ R T
Sbjct: 247 SDVLYGIYQAKQAIRSQDNCYLVEGYTDVISMHLSGIENVVASSGTSLTESQIKLIKRFT 306

Query: 309 NHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSYVRKYGKADFEQQ 368
           ++V   YDGD AG  A+ R ++     L+ G  +K +  P+G+DPDSY RK G   F+  
Sbjct: 307 DNVTVLYDGDAAGIKASLRGID---MLLEGGLNVKAVVFPEGDDPDSYSRKVGSEAFQAY 363

Query: 369 VANATPLSQYLFENLIELHQINLGSHEGKSA--LRAVATPLIDKIPDPFLQEILEK 422
           + +    ++      IEL+         K A  +R V    + KIPDP  + +  K
Sbjct: 364 LHDH---ARDFIAFKIELYAEEAAHDPIKRADTVRQVVQS-VAKIPDPITRSVYVK 415