Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., DNA primase from Caulobacter crescentus NA1000 Δfur

 Score =  267 bits (683), Expect = 9e-76
 Identities = 167/442 (37%), Positives = 245/442 (55%), Gaps = 26/442 (5%)

Query: 9   FIDDLLARLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYHCFGCGAHG 68
           F+++L +RL   DV+   VKL+++G+ Y+   PF  EK+PSF V+ EK FYHCF  G HG
Sbjct: 7   FLEELKSRLRPSDVVGKTVKLRRQGREYAGLSPFTKEKSPSFFVNDEKGFYHCFSSGKHG 66

Query: 69  NAIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDKRSLYDLMG 128
           + I F+ E ER+ F EA+E LA+  G+         S P      A + + + SL D M 
Sbjct: 67  DIISFLQETERLTFAEAVERLAAEAGM---------SLPEVDPRAAREEQKRSSLGDWME 117

Query: 129 SIAQFYRQQLKVPANKHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVRRNFGQQRSSEDM 188
             A ++  +L+ P  + A  YL+ RGL      +F IG+  +    ++     + +    
Sbjct: 118 LAAAWFESELRRPVGQTARAYLEKRGLPESEWSRFRIGFAPNNRTGLKDYLIAKGAKPGD 177

Query: 189 LVTAGMLI-ENDNGRRYDRFRGRVMFPIRDRRGRVIGFGGRITEQGT-PKYLNSPETPIF 246
           LV AG+LI   D G  YDRFR R++FPI D RG+V+ FGGR  +     KYLN PET +F
Sbjct: 178 LVDAGVLIAPEDGGAPYDRFRDRIIFPIADSRGKVVSFGGRAMDPAARAKYLNGPETSLF 237

Query: 247 HKGKELYGLYEVL------QAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTSTTGDH 300
           HKG+ LYGL+E        Q+  E P ++VVEGYMDV+A  + GV  +VA++GT+ T + 
Sbjct: 238 HKGRVLYGLFEARKILHAGQSGGEKPPMVVVEGYMDVIACQRAGVP-AVAAMGTALTEEQ 296

Query: 301 LQLLFRQTNHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSYVRKY 360
           ++ L+R       C+DGD+AG+ AA RA++ AL  LK G    F     G+DPD  +R+ 
Sbjct: 297 MEGLWRLHPTPTLCFDGDKAGKRAADRAIDRALPLLKPGRSFLFSMPVGGKDPDDVLREQ 356

Query: 361 GKADFEQQVANATPLSQYLFENLIELHQINLGSHEG--KSALRAVATPLIDK-IPDPFLQ 417
           G A  + QV++  P  Q LFE   E+   +        K  LR +A  + DK +   + +
Sbjct: 357 GPAALKAQVSDTKPFVQALFEREKEVEPFDTPEQRTNLKVRLRTLAATIADKDLAHAYKE 416

Query: 418 EILEKLLDERTGFDHQLRRKKA 439
           E+L++L + R       RR KA
Sbjct: 417 ELLDRLDEMRAA-----RRVKA 433