Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 592 a.a., DNA primase from Alteromonas macleodii MIT1002

 Score =  537 bits (1384), Expect = e-157
 Identities = 289/603 (47%), Positives = 399/603 (66%), Gaps = 27/603 (4%)

Query: 1   MAGHIPRSFIDDLLARLDIVDVIDARVKLKKKGKNYSACCPFHNEKTPSFSVSQEKQFYH 60
           MAG IPR FIDDLL+R D+V+V+D+RVKLKK GKNY ACCPFHNEK+PSF+VSQ+KQFYH
Sbjct: 1   MAGKIPRDFIDDLLSRTDVVEVVDSRVKLKKAGKNYQACCPFHNEKSPSFTVSQDKQFYH 60

Query: 61  CFGCGAHGNAIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDK 120
           CFGCGAHGNAI F+ME++R+EF EAIEELA   GLEV RE+ +         PA+  E K
Sbjct: 61  CFGCGAHGNAISFIMEFDRLEFVEAIEELARYHGLEVPREKGS--------RPAMSEEKK 112

Query: 121 RSLYD---LMGSIAQFYRQQLKVPAN-KHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVR 176
           +   D   +M  +A+F++ QL+   N K AI+YLKNRGLSG+IV+++ IGY  D WD + 
Sbjct: 113 QQQQDDYAVMEQVARFFQHQLRQNGNSKKAIDYLKNRGLSGDIVKQWEIGYAPDSWDALL 172

Query: 177 RNFGQQRSSEDMLVTAGMLIENDNGRRYDRFRGRVMFPIRDRRGRVIGFGGRITEQGTPK 236
             FG+       LV   ++ +ND GR YD FR R+MFPIRD+RGRV+GFGGR+ + G PK
Sbjct: 173 NTFGKDPQRIKQLVDLKLVNKNDQGRTYDFFRDRIMFPIRDKRGRVVGFGGRVLDDGGPK 232

Query: 237 YLNSPETPIFHKGKELYGLYEVLQAYREPPQILVVEGYMDVVALAQYGVDYSVASLGTST 296
           YLNSPET IFHKG EL+G Y   Q  R    +++VEGYMDVVAL+Q+ ++ + A+LGT+T
Sbjct: 233 YLNSPETRIFHKGSELFGFYSARQKNRSLDTVVIVEGYMDVVALSQFDINIATAALGTAT 292

Query: 297 TGDHLQLLFRQTNHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSY 356
           T +H+Q+L R T+H++CCYDGDRAGR+AAWRALENAL  LK G  + FLFLPDGEDPD+ 
Sbjct: 293 TPEHIQMLVRATSHIVCCYDGDRAGREAAWRALENALPALKDGVRISFLFLPDGEDPDTM 352

Query: 357 VRKYGKADFEQQVANATPLSQYLFENLIELHQINLGSHEGKSALRAVATPLIDK-IPDPF 415
           VR+ GK  F + + +A PLS++ FENL++ H  N+G+ EGK AL+  A PLI+  + D  
Sbjct: 353 VRQVGKDAFMEMLDDAMPLSRFFFENLLKTH--NVGTPEGKIALKKAAMPLIESTLGDDQ 410

Query: 416 LQEILEKLLDERTGFDH-QLRR--------KKARKTENRPAPHKAIKRTPMRDVIALLIQ 466
            Q +LE+L      FD  +L++         K   + NR   +K  K +P+R +I LL+ 
Sbjct: 411 KQMLLEELAKHTGEFDRFKLQQDITKANQGSKQAYSPNRNQVNKP-KLSPLRMLIRLLLD 469

Query: 467 NPSYAELVPD--LASVRHLMIPGLDTFSEVLEKCRQYPHITTGQLLEHWRDSKNETLLSR 524
            P  A L  D  +         G+D   +V   C  +P   T QL+E++RD  + + +++
Sbjct: 470 KPELATLCEDVQIDIFAGSNAAGMDLLRDVHRYCVSHPQAKTAQLVENFRDHPHSSTIAK 529

Query: 525 LASWEIPLVEDNQEELFLDSLDKILAQCVEKQIENLQAKERSVGLSTEEKRELQDLILKG 584
           L   E  + +++ E ++ DS  ++L    + +IE L ++ R   L+  EK+EL  L+ + 
Sbjct: 530 LLLQEHLVKDEDAERVYNDSFARLLDGHFDSRIETLISRSRVQPLTQAEKQELNLLMRER 589

Query: 585 LKA 587
            K+
Sbjct: 590 QKS 592