Pairwise Alignments

Query, 587 a.a., DNA primase from Vibrio cholerae E7946 ATCC 55056

Subject, 661 a.a., DNA primase from Agrobacterium fabrum C58

 Score =  274 bits (700), Expect = 1e-77
 Identities = 156/429 (36%), Positives = 238/429 (55%), Gaps = 22/429 (5%)

Query: 8   SFIDDLLARLDIVDVIDARVKLKKKGKN-----YSACCPFHNEKTPSFSVSQEKQFYHCF 62
           SF+D++  R++I DVI  RV   KK  N     Y ACCPFH EK+PSF     K  YHCF
Sbjct: 6   SFLDEIRDRVNISDVIGRRVSWDKKKTNAPRGDYWACCPFHGEKSPSFHCEDRKGRYHCF 65

Query: 63  GCGAHGNAIDFVMEYERMEFPEAIEELASTIGLEVQREERTPSSPFAKNTPAVKSEDKRS 122
           GCG  G+   F+ E E + FPEA++++A   G+ + + +     P A+     +  ++ S
Sbjct: 66  GCGVSGDHFRFLTELEGLSFPEAVQQIADMAGISMPQPD-----PQAEK----RERERTS 116

Query: 123 LYDLMGSIAQFYRQQLKVPANKHAIEYLKNRGLSGEIVQKFGIGYIADEWDLVRRNFGQQ 182
           L D+M     F++ QL+      A  YL++RGL+G  ++ F +GY  D  + ++ +   +
Sbjct: 117 LQDVMEMATLFFQDQLQTSLGARARAYLRDRGLTGRTIETFRLGYAPDSRNALKEHLASK 176

Query: 183 RSSEDMLVTAGMLIENDNGRRYDRFRGRVMFPIRDRRGRVIGFGGR-ITEQGTPKYLNSP 241
             S++ +   G+++  +    YDRFR R+MFPI   R +VI FGGR +      KYLNS 
Sbjct: 177 GVSKEQMEACGLVVHENVPVSYDRFRDRIMFPILSSREKVIAFGGRAMAADAVAKYLNSN 236

Query: 242 ETPIFHKGKELYGLYEVLQAYREPP-QILVVEGYMDVVALAQYGVDYSVASLGTSTTGDH 300
           ET +FHKG  LY      +A +     ++ VEGYMDV+AL Q GV+ +VA LGT+ T   
Sbjct: 237 ETELFHKGNVLYNFARARRASQAAGGTVIAVEGYMDVIALYQAGVENAVAPLGTALTDSQ 296

Query: 301 LQLLFRQTNHVICCYDGDRAGRDAAWRALENALSYLKSGNILKFLFLPDGEDPDSYVRKY 360
           L LL++ +   + C+DGD AG  AA RA + AL ++K    + F  LPDG+DPD  VR  
Sbjct: 297 LDLLWKMSPQPVLCFDGDGAGIRAANRAADLALPHIKPDRSVSFALLPDGKDPDDLVRLE 356

Query: 361 GKADFEQQVANATPLSQYLFENLIELHQINLGSHEGK----SALRAVATPLIDKIPDPFL 416
           G+A F++ ++ A PL+  ++    E   +   + E +    S LR + T + D+    F 
Sbjct: 357 GRAPFDRVLSEAKPLAAMIWSR--ETSGVTFDTPEKRAQLESRLRQIVTVIADETVRRFY 414

Query: 417 QEILEKLLD 425
           Q+ +   L+
Sbjct: 415 QQDMRDRLN 423