Pairwise Alignments

Query, 413 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., integrase from Rhodanobacter sp. FW510-T8

 Score =  216 bits (550), Expect = 1e-60
 Identities = 136/405 (33%), Positives = 211/405 (52%), Gaps = 20/405 (4%)

Query: 1   MAKRVVPLTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISF 60
           MA     LT+ + + A  S K +   DG GL L V T   + W LKY H    K   ++ 
Sbjct: 1   MATGTGKLTDLKCRSAP-SGKHF---DGGGLFLHV-TEAGRYWRLKYRH--AGKEKLLAL 53

Query: 61  GCFPDVSLAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKYSDRWLTLKRE 120
           G +P+V+L++AR RR EA+ L+    DP   +    L+ +   +NTF   +  WL LK  
Sbjct: 54  GVYPEVTLSKARHRRDEARALVQDGRDPGAERQADKLRAKVAADNTFEAVAREWLALKAH 113

Query: 121 SVKPETADKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINE 180
              P   DK    LE H  P +G +P+ DI    +  +L  V  +G LE   RL   ++ 
Sbjct: 114 EWTPRQHDKERDRLENHAFPWIGRLPVADIGVPEIRPLLTRVVNRGHLEQSHRLRHQLSR 173

Query: 181 VMRLAVASGDIEVNYLADITKLFPAPKRQHMVTI-EPERLPELMQAIANANITLATRCLL 239
           V R AVA+     +  AD+    PA +R++  TI +P+++ EL++AI   + T    C L
Sbjct: 174 VFRYAVATERATRDPAADLRDTLPARQRKNFPTITDPKQVGELLRAIDAYSGTFEVSCAL 233

Query: 240 EWQLHTMTRPIESATARWQ--DIDFKNKVWVIPAERMKMKR---------PHTIPLTEQT 288
           +       RP E   A W+  D+D +   + +P    K+++         PH +PL+ Q 
Sbjct: 234 KLAPLWFCRPGEIRLAEWEHFDLDGELPSYTVPPANRKLRKAEKENPNTPPHIVPLSRQA 293

Query: 289 LALLEIMKPISSHREYIFPSNKNPKSHVNSQSANMALKRMGYKGQLVSHGLRALASTTLN 348
           LA+L  ++P++ H  Y+FP  + P   ++  + NMAL RMGYKG L  HG R +A T L 
Sbjct: 294 LAVLRELQPLTGHGRYLFPGARTPSRPMSDGAVNMALARMGYKGVLTGHGFRHMARTLLG 353

Query: 349 EQGFNPDIIEAALAHVDKNEVRKAYNRAEYLEQRRKLMSWWSSHI 393
           E G+NP+ +E  L+H +   V   YN+A++L +RRK+M  W+ ++
Sbjct: 354 ELGWNPEALERQLSHKEPG-VAGIYNKAQHLPERRKIMQAWADYL 397