Pairwise Alignments

Query, 413 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., DUF4102 domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  201 bits (511), Expect = 3e-56
 Identities = 120/394 (30%), Positives = 202/394 (51%), Gaps = 9/394 (2%)

Query: 6   VPLTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISFGCFPD 65
           +PLT+ Q+K AK +DK   L+DG G+ L V     + W LKY      K   ++ G +PD
Sbjct: 1   MPLTDLQIKAAKPADKPIKLADGGGMFLLVTPQDQRYWRLKYR--FGGKEKLLALGVYPD 58

Query: 66  VSLAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKYSDRWLTLKRESVKPE 125
           V++  AR+ R +AK  LA  IDP   +  +   +  +  ++F   +  W      +    
Sbjct: 59  VTIKTARQLRDDAKKQLANGIDPSDARKAKKSSQLLDGPDSFENVAREWFAKNVATWAET 118

Query: 126 TADKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINEVMRLA 185
            + K  + LE  + P +G  PI  I    +L++   ++A+G  +T  R  +   ++MR A
Sbjct: 119 HSSKVLQRLESDVFPLIGTKPIGSITAPMILAVARKIEARGANDTAHRAVQNAGQIMRYA 178

Query: 186 VASGDIEVNYLADITKLFPAPKRQHMVTI-EPERLPELMQAIANANITLATRCLLEWQLH 244
           VA+G  E +   D+    P  + +H   + +P+ + EL++A      T+  +  L+    
Sbjct: 179 VATGRAERDPTGDLRGALPPVRHKHFAALTDPKLVGELLRAFDAFEGTVVVKAALQLAPL 238

Query: 245 TMTRPIESATARWQDIDFKNKVWVIPAERMKMKR--PHTIPLTEQTLALLEIMKPISSHR 302
              RP E   A+W DID     W   A + +      H +PL+ Q + +L  +   + +R
Sbjct: 239 VFVRPGELRKAKWADIDLDAGSWAFHASKARKGETIEHLVPLSTQAVEILRDLHQYTGNR 298

Query: 303 EYIFPSNKNPKSHVNSQSANMALKRMGY--KGQLVSHGLRALASTTLNEQ-GFNPDIIEA 359
           E +FP  ++P+  ++  + N AL+R+GY  K ++  HG RA+A T L EQ G +P +IE 
Sbjct: 299 ECLFP-GRDPRKPMSEAAVNAALRRLGYDTKTEITGHGFRAMARTILAEQLGEDPHVIEQ 357

Query: 360 ALAHVDKNEVRKAYNRAEYLEQRRKLMSWWSSHI 393
            LAH   + + +AYNR +Y+EQRR +M  WS ++
Sbjct: 358 QLAHRVPDALGRAYNRTKYIEQRRAMMQRWSDYL 391