Pairwise Alignments

Query, 413 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 200 a.a., integrase arm-type DNA-binding domain-containing protein from Erwinia tracheiphila SCR3

 Score =  156 bits (394), Expect = 6e-43
 Identities = 79/189 (41%), Positives = 120/189 (63%), Gaps = 1/189 (0%)

Query: 1   MAKRVVPLTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISF 60
           MA++  PL NT+VK AK  +++ TL DGD L+  VK  G+KLW  +Y  P T+KR  ISF
Sbjct: 1   MARQTKPLNNTEVKNAKAPERDTTLYDGDSLEQLVKPGGSKLWRFRYYKPFTRKRAMISF 60

Query: 61  GCFPDVSLAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKYSDRWLTLKRE 120
           G +P VSL+E R+ R +A+ LL+  IDP++HK  + L++++  E+TF K +  W   K  
Sbjct: 61  GAYPAVSLSETRQLREDARLLLSKYIDPQEHKKIEQLRQKSATESTFEKVAGDWFKTKES 120

Query: 121 S-VKPETADKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIIN 179
           + +   T +  + ++ K++ P +G++PI +I  +  +  LEP  A G LETVKRL + IN
Sbjct: 121 TGLSTHTLNDIWHSVSKYVFPHIGSMPIANITAQQFIGALEPTHATGRLETVKRLSQRIN 180

Query: 180 EVMRLAVAS 188
           EVM L + S
Sbjct: 181 EVMELTLRS 189