Pairwise Alignments

Query, 413 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., Integrase from Enterobacter asburiae PDN3

 Score =  264 bits (675), Expect = 3e-75
 Identities = 136/388 (35%), Positives = 217/388 (55%), Gaps = 2/388 (0%)

Query: 6   VPLTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISFGCFPD 65
           +PL + Q+++AK   K YTL DG GL L ++ NG+K W  +Y      K   IS G +P 
Sbjct: 1   MPLNDMQIRRAKPEAKAYTLGDGQGLSLLIEPNGSKSWRFRYR--FAGKPKMISLGVYPT 58

Query: 66  VSLAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKYSDRWLTLKRESVKPE 125
           ++LA+AR RR +A+ L+A   +P + + EQ +  + E EN F K +  W  +K       
Sbjct: 59  ITLADARSRREDARKLVAEGKNPSEVRKEQKIALQTESENAFEKIATEWHQMKSTKWSAG 118

Query: 126 TADKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINEVMRLA 185
            A     A +  I P +G  PI +IKP  +L++L  ++ +G LE ++++ +  +EV R A
Sbjct: 119 YASDIMEAFQNDIFPYVGERPIGEIKPLELLNVLRKIEKRGALEKMRKVRQRCSEVFRYA 178

Query: 186 VASGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIANANITLATRCLLEWQLHT 245
           +A+G  E N  AD++      +  H   ++ + + + ++A+ +   +   +   +  + T
Sbjct: 179 IATGRAEFNPAADLSSALEVHQSNHYPFLKADEITDFLRALDSYTGSRLVQIATKLLMIT 238

Query: 246 MTRPIESATARWQDIDFKNKVWVIPAERMKMKRPHTIPLTEQTLALLEIMKPISSHREYI 305
             R IE   A W + D  N +W IPAERMKM+R H +PL+ Q L LL  +K ++ +  Y+
Sbjct: 239 GVRTIELRAALWSEFDLDNALWEIPAERMKMRRAHLVPLSTQALDLLNELKIMTGNYRYV 298

Query: 306 FPSNKNPKSHVNSQSANMALKRMGYKGQLVSHGLRALASTTLNEQGFNPDIIEAALAHVD 365
           FP   +P   ++  S N  +KR+GY G+L  HG R   ST L+E+G+    IE  LAHVD
Sbjct: 299 FPGRNDPNKPMSEASINQLIKRIGYGGKLTGHGFRHTLSTILHERGYESIWIEMQLAHVD 358

Query: 366 KNEVRKAYNRAEYLEQRRKLMSWWSSHI 393
           KN +R  YN A+Y+  RR ++SW+S  I
Sbjct: 359 KNNIRGTYNHAQYISNRRVMLSWYSDFI 386