Pairwise Alignments

Query, 413 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., integrase from Escherichia coli ECRC101

 Score =  164 bits (414), Expect = 4e-45
 Identities = 94/265 (35%), Positives = 152/265 (57%), Gaps = 4/265 (1%)

Query: 8   LTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISFGCFPDVS 67
           LT+T+V+ AK  +KEY+L DGDG+ L VK  G+K W  ++      K++ ++FG +PDVS
Sbjct: 3   LTDTKVRSAKPEEKEYSLVDGDGMSLLVKPGGSKYWRFRFR--FGGKQHLMAFGVYPDVS 60

Query: 68  LAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKYSDRWLTLKRESVKPETA 127
           LA+ARK+R EA+ L+A  IDP++HK   + +E+A+   TF K +  WL +  +    + A
Sbjct: 61  LADARKKREEARKLVAAGIDPREHK-RAVKEEQAKEIITFEKVAREWL-VTNQKWSEDHA 118

Query: 128 DKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINEVMRLAVA 187
           ++  ++LE +I P +G   I ++  R +L  ++ V+  G LE   RL +    +MR AV 
Sbjct: 119 NRVKKSLEDNIFPTIGTRNIAELGTRDLLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQ 178

Query: 188 SGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIANANITLATRCLLEWQLHTMT 247
           SG I+ +   +++    +  RQH   +E +R+PEL+  I +      T C  E  L    
Sbjct: 179 SGLIDYDPAQEMSGAVASSNRQHRPALELKRIPELLDKIDSYTGRPLTHCTTELTLLIFI 238

Query: 248 RPIESATARWQDIDFKNKVWVIPAE 272
           R  +   ARW +IDF+  +W IP +
Sbjct: 239 RSSKLHFARWSEIDFETSMWTIPLD 263