Pairwise Alignments

Query, 413 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., site-specific integrase from Dickeya dianthicola ME23

 Score =  153 bits (386), Expect = 1e-41
 Identities = 118/398 (29%), Positives = 186/398 (46%), Gaps = 17/398 (4%)

Query: 8   LTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISFGCF--PD 65
           LT+T++K  K  +K Y +SD DGL + V T+G+  +  +Y + I  +R  +  G +    
Sbjct: 2   LTDTKLKNLKPEEKLYKVSDRDGLYVAVLTSGSVSF--RYDYRINGRRETLVIGQYGRDG 59

Query: 66  VSLAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKYSDRWLTLKRESVKPE 125
           +SLAEAR+    AK LL     P   K + + K R     TF  ++D ++  K   +   
Sbjct: 60  ISLAEAREELIAAKKLLKAGQSPAAAKRDGIKKIRGA--ETFAVHTDHYM--KHIVLADS 115

Query: 126 TADKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINEVMRLA 185
           T       +E+ I+P LGN  + +I    V  + + +  +G   T  +   II+ V R A
Sbjct: 116 TRTMKESVIERDIMPVLGNKMMAEITTSMVRDLCDRIVERGGRATAVQAREIISSVYRHA 175

Query: 186 VASGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIANANITLATRCLLEWQLHT 245
              G    N  +DI     A  +     ++PE +    + +         +  L+  L T
Sbjct: 176 NDRGHGLFNPASDIKPSSIAMFKPRDRCLQPEEVGIFFRTLDTVAAMATMKLALKLVLLT 235

Query: 246 MTRPIESATARWQDIDFKNKVWVIPAERMKMKRPHTIPLTEQTLALLEIMKPISSHREYI 305
           M R  E   A W+++DFK   WVIP++RMK  R H I L  Q   L+  ++  +   EY+
Sbjct: 236 MVRKNEFINATWKEVDFKKWEWVIPSDRMKGSRAHVIYLPRQAQDLMVGLQMCAGGSEYL 295

Query: 306 FPSNKNPKSHVNSQSANM-------ALKRMGYK-GQLVSHGLRALASTTLNEQGFNPDII 357
            P   +    +++ + N        A +  GY       H +R  AST L+E G+  D I
Sbjct: 296 LPGRYSVIRPLSNSALNRLITTTVEAAQAAGYNLEHFAVHDMRRTASTLLHEAGYPSDWI 355

Query: 358 EAALAHVDKNEVRKAYNRAEYLEQRRKLMSWWSSHITS 395
           E ALAH ++  VR  YN+AEY  QR  ++  W+  I S
Sbjct: 356 EKALAH-EQRGVRSVYNKAEYARQRAYMLQQWADMIDS 392