Pairwise Alignments

Query, 413 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 423 a.a., integrase arm-type DNA-binding domain-containing protein from Dickeya dianthicola ME23

 Score =  227 bits (579), Expect = 4e-64
 Identities = 136/403 (33%), Positives = 216/403 (53%), Gaps = 22/403 (5%)

Query: 8   LTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISFGCFPDVS 67
           L +T+++  K       LSD  GL L VK  G++LW  +Y      K   I+ G +P +S
Sbjct: 3   LNDTKIRNLKPPVTPIKLSDSHGLYLHVKPTGSRLWYFRYY--FFGKETRIALGAYPLIS 60

Query: 68  LAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKYSDRWLTLKRESVKPETA 127
           L+EAR++R E + LLA NI+P Q +  +  K        F   +  W    R   +   A
Sbjct: 61  LSEARQKRDELRKLLAQNINPTQQRAAE--KAARSPAKNFKTVALSWHKSNRTWSENHAA 118

Query: 128 DKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINEVMRLAVA 187
            +   ++  HI P +G++PI ++K R  + +L+ ++ +G LE   R  + +  +MR AV 
Sbjct: 119 -RLLASMNNHIFPIIGHLPITELKTRHFIDLLKGIEKKGLLEVAARTRQHMCNIMRHAVH 177

Query: 188 SGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIAN-ANITLATRCLLEWQLHTM 246
              IE N  A++  +   P ++H   +  ERLPEL+ +I +       TR  +   LH  
Sbjct: 178 QELIEHNPAANLDGIIAPPVKRHYPALLLERLPELLASIEDYKQGRELTRLAVSLTLHLF 237

Query: 247 TRPIESATARWQDIDFKNKVWVIPAER------------MKMKRPHTIPLTEQTLALLEI 294
            R  E   ARW +IDF+NK+W IPA R             KM+ PH +PL+ Q++ +L+ 
Sbjct: 238 IRSSELRFARWSEIDFRNKIWTIPATREAIPGVRYSGRGAKMRTPHIVPLSRQSITILKQ 297

Query: 295 MKPISSHREYIFPSNKNPKSHVNSQSANMALKRMGY--KGQLVSHGLRALASTTLNEQG- 351
           ++ IS H+E IFP + NP   +   + N AL+ MGY  K ++  HG RA+A + L E G 
Sbjct: 298 IREISGHQELIFPGDHNPYKPMCENTVNKALRLMGYDTKDEICGHGFRAMACSALMESGL 357

Query: 352 FNPDIIEAALAHVDKNEVRKAY-NRAEYLEQRRKLMSWWSSHI 393
           +  D +E  ++H ++N VR AY ++AEYL+ R+ +M WWS ++
Sbjct: 358 WAQDAVERQMSHQERNSVRAAYIHKAEYLDARKAMMQWWSDYL 400