Pairwise Alignments

Query, 413 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., integrase arm-type DNA-binding domain-containing protein from Dickeya dianthicola ME23

 Score =  233 bits (595), Expect = 6e-66
 Identities = 135/403 (33%), Positives = 218/403 (54%), Gaps = 22/403 (5%)

Query: 8   LTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISFGCFPDVS 67
           L +++++  K   K + +SD  GL L +   G++LW LKY   I KK + +  G +PDVS
Sbjct: 3   LNDSKIRNLKSLAKPFKVSDSHGLYLLINPGGSRLWYLKYR--INKKESRLGLGTYPDVS 60

Query: 68  LAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKYSDRWLTLKRESVKPETA 127
           LA+AR++R   + LLA NI+P Q +  +  +  +  E TF   +  W    R +     A
Sbjct: 61  LADARQQRDGIRKLLAQNINPAQQRSAE--RTTSSPEKTFKTVALSWHKSNR-TWSENHA 117

Query: 128 DKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINEVMRLAVA 187
            +   ++  HI P +G+ P+ ++KPR  + +L+ ++ +G LE   R  + +  +MR AV 
Sbjct: 118 TRLLASMNNHIFPVIGHQPVTELKPRHFIELLKGIEKKGLLEVAARTRQHLCNIMRHAVH 177

Query: 188 SGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIAN-ANITLATRCLLEWQLHTM 246
              IE N  A++  +   P ++H   +  E+LPEL+  I         TR  +   LH  
Sbjct: 178 QELIEHNPAANLDGIIATPVKRHYPALPLEQLPELLTRIEGYRQGRELTRLAVLLTLHLF 237

Query: 247 TRPIESATARWQDIDFKNKVWVIPAER------------MKMKRPHTIPLTEQTLALLEI 294
            R  E   ARW +IDF+N +W IPA R             KM+ PH +PL+ Q +A+L+ 
Sbjct: 238 IRSSELRFARWSEIDFRNHIWTIPATREAIPGVRYSGRGAKMRTPHIVPLSRQAIAILKQ 297

Query: 295 MKPISSHREYIFPSNKNPKSHVNSQSANMALKRMGYKGQ--LVSHGLRALASTTLNEQG- 351
           ++ IS H+  +FP + NP   +   + N AL+ MGY  Q  +  HG RA+A + L E G 
Sbjct: 298 IREISGHQVLVFPGDHNPYKPMCENTVNKALRLMGYDTQNNICGHGFRAMACSALMESGL 357

Query: 352 FNPDIIEAALAHVDKNEVRKAY-NRAEYLEQRRKLMSWWSSHI 393
           ++ D +E  ++H ++N VR AY  +AEYL+ R+ +M WWS ++
Sbjct: 358 WSQDAVERQMSHQERNSVRAAYIQKAEYLDARKAMMQWWSDYL 400