Pairwise Alignments

Query, 413 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., integrase arm-type DNA-binding domain-containing protein from Dickeya dianthicola ME23

 Score =  234 bits (598), Expect = 3e-66
 Identities = 134/403 (33%), Positives = 222/403 (55%), Gaps = 22/403 (5%)

Query: 8   LTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISFGCFPDVS 67
           L +++++  K S K + +SD  GL L +   G++LW LKY   I +K + +  G +PDVS
Sbjct: 3   LNDSKIRNLKPSAKPFKVSDSHGLYLLINPGGSRLWYLKYR--INRKESRLGLGTYPDVS 60

Query: 68  LAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKYSDRWLTLKRESVKPETA 127
           LA+AR++R   + LLA NI+P   +  +  K     E +F   +  W    R +     A
Sbjct: 61  LADARQQRDGIRKLLAQNINPAHQRAAE--KVSRSPEKSFRDVALDWHKSNR-TWSENHA 117

Query: 128 DKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINEVMRLAVA 187
            +   ++  H+ P +G++P+ ++K R  + +L+ ++ +G LE   R  + +  +MR AV 
Sbjct: 118 TRLLASMNNHLFPVIGHLPVTELKARHFIDLLKGIEKKGLLEVAARTRQHLCNIMRYAVH 177

Query: 188 SGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIAN-ANITLATRCLLEWQLHTM 246
              IE N  A++  +   P ++H   ++ ERLPEL+ +I +       TR  +   LH  
Sbjct: 178 QELIEHNPAANLDGIIAPPVKRHYPALQLERLPELLASIEDYKQGRELTRLAVSLTLHLF 237

Query: 247 TRPIESATARWQDIDFKNKVWVIPAER------------MKMKRPHTIPLTEQTLALLEI 294
            R  E   ARW +IDF+N +W IPA R             KM+ PH +PL+ Q +A+L  
Sbjct: 238 IRSSELRFARWSEIDFRNHIWTIPATREAIPGVRYSGRGAKMRTPHIVPLSRQAIAILRQ 297

Query: 295 MKPISSHREYIFPSNKNPKSHVNSQSANMALKRMGY--KGQLVSHGLRALASTTLNEQG- 351
           ++ IS H+  IFP + NP   +   + N AL+ MGY  K ++  HG RA+A + L E G 
Sbjct: 298 IQEISGHQVLIFPGDHNPYKPMCENTVNKALRLMGYDTKDEICGHGFRAMACSALMESGL 357

Query: 352 FNPDIIEAALAHVDKNEVRKAY-NRAEYLEQRRKLMSWWSSHI 393
           ++ D +E  ++H+++N VR AY ++AEYL+ R+ +M WWS ++
Sbjct: 358 WSQDAVERQMSHLERNSVRAAYIHKAEYLDARQAMMQWWSDYL 400