Pairwise Alignments

Query, 413 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., tyrosine-type recombinase/integrase from Dickeya dianthicola ME23

 Score =  422 bits (1085), Expect = e-123
 Identities = 204/389 (52%), Positives = 280/389 (71%)

Query: 1   MAKRVVPLTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISF 60
           MA+   PLT+ +V++AK +DK+ TL DG+GL L VKT G KLW  +Y  P T +R  I F
Sbjct: 1   MARTTRPLTHIEVQKAKAADKDLTLHDGNGLFLLVKTTGKKLWRFRYQKPTTGQRTMIGF 60

Query: 61  GCFPDVSLAEARKRRSEAKTLLALNIDPKQHKDEQLLKERAELENTFGKYSDRWLTLKRE 120
           G +P +SLA+ R  R E  +LLA  IDP++   +++ + +  +E+ F   +  W TLK+ 
Sbjct: 61  GAYPALSLADVRAMRDEKLSLLAKGIDPQEKVAKEVEEAQIAVESLFINVARSWFTLKQA 120

Query: 121 SVKPETADKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINE 180
           +V  + A   +R+LEK +LP + N+P+Q IK RT++  LEP+KA+G LETV+RL + INE
Sbjct: 121 TVSTDHAKDIWRSLEKDVLPAIENIPVQQIKARTLIQALEPIKARGALETVRRLVQRINE 180

Query: 181 VMRLAVASGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIANANITLATRCLLE 240
           +M  AV +G I+ N  + I   F  PK+QHM TI PE LP LM+ IA +N+++ TRCLLE
Sbjct: 181 IMVYAVNTGLIDANPASGIGMAFERPKKQHMPTIRPEELPALMRTIAMSNLSIPTRCLLE 240

Query: 241 WQLHTMTRPIESATARWQDIDFKNKVWVIPAERMKMKRPHTIPLTEQTLALLEIMKPISS 300
           WQL T+ RP E++   W +ID + K W IPAERMK KR H +PL+EQ L LL+IM+PIS 
Sbjct: 241 WQLLTLIRPAEASATAWAEIDIEKKTWSIPAERMKAKRDHIVPLSEQALELLDIMRPISG 300

Query: 301 HREYIFPSNKNPKSHVNSQSANMALKRMGYKGQLVSHGLRALASTTLNEQGFNPDIIEAA 360
           +R+Y+FPS  +PK  +NSQ+AN ALKR+GY G+LV+HGLR++AST +NE GFNPD+IE+A
Sbjct: 301 NRDYVFPSRNDPKKPMNSQTANAALKRIGYGGKLVAHGLRSIASTAMNEAGFNPDVIESA 360

Query: 361 LAHVDKNEVRKAYNRAEYLEQRRKLMSWW 389
           LAH DKNEVR+AYNR+ YLEQR++LM WW
Sbjct: 361 LAHCDKNEVRRAYNRSTYLEQRKELMDWW 389