Pairwise Alignments

Query, 413 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., tyrosine-type recombinase/integrase from Dickeya dadantii 3937

 Score =  247 bits (631), Expect = 4e-70
 Identities = 147/407 (36%), Positives = 224/407 (55%), Gaps = 27/407 (6%)

Query: 6   VPLTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISFGCFPD 65
           +PLT+T ++ AK  DK Y LSD  GL L +K NG+KLW LKY      K   ++FG +P 
Sbjct: 1   MPLTDTAIRNAKPLDKPYKLSDAQGLYLLIKPNGSKLWHLKYR--FGGKEKKLAFGAYPT 58

Query: 66  VSLAEARKRRSEAKTLLALNIDP---KQHKDEQLLKERAELENTFGKYSDRWLTLKRESV 122
           VSLA ARK R EA+T+L+   DP   KQH D+Q  K      NTF   + +W+       
Sbjct: 59  VSLANARKLREEARTILSAGDDPGVKKQH-DKQAKKNG----NTFEAIARQWVAANIRWS 113

Query: 123 KPETADKAYRALEKHILPKLGNVPIQDIKPRTVLSILEPVKAQGTLETVKRLCRIINEVM 182
           +   A K  R+LE H+ P +GNV + D+K   +L  L   + +G LET  R+ +    +M
Sbjct: 114 EAHAA-KVLRSLELHVFPLIGNVLVTDLKTANLLIPLRVAEKKGCLETAARIQQRTTVIM 172

Query: 183 RLAVASGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIANANITLATRCLLEWQ 242
           R AV  G I  N   D+      P + H   +  ERLPEL++ I   +  L TR  ++  
Sbjct: 173 RYAVQEGLIASNPANDLCGAITPPPKNHYPALPLERLPELLERIEGYSGRLLTRLAVQLN 232

Query: 243 LHTMTRPIESATARWQDIDFKNKVWVIPAER------------MKMKRPHTIPLTEQTLA 290
           L    R  E   ARW +ID  N +W +PA+R             KMK PH +PL++Q + 
Sbjct: 233 LLIFIRSSELRFARWTEIDLDNAMWTLPAQREPITGVRHSERGAKMKTPHLVPLSKQAVT 292

Query: 291 LLEIMKPISSHREYIFPSNKNPKSHVNSQSANMALKRMGYKGQ--LVSHGLRALASTTLN 348
           +L+ +K +S + + +FP + + +  ++  + N AL+ MGY  Q  +  HG R +A + L 
Sbjct: 293 VLKQLKLLSGNGDLLFPGDHDARKPMSENTINKALRTMGYDTQADICGHGFRTIACSALI 352

Query: 349 EQG-FNPDIIEAALAHVDKNEVRKAY-NRAEYLEQRRKLMSWWSSHI 393
           E G ++ D +E  ++H ++N VR AY ++AE+L++R ++M WWS ++
Sbjct: 353 ESGRWSKDAVERQMSHQERNHVRAAYIHKAEHLDERTQMMQWWSDYL 399