Pairwise Alignments

Query, 410 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 435 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 62.8 bits (151), Expect = 2e-14
 Identities = 88/414 (21%), Positives = 174/414 (42%), Gaps = 37/414 (8%)

Query: 5   IAKQAITDENLTIVGYELLFRNSEKNRYPEGVSESLATKKIIWQQFVDDTIDRVVESDK- 63
           +A   + D    +VGY L +R + +   P G   S   K ++      DT+   +  +  
Sbjct: 34  VAYAMLLDAQRRVVGYRLAWRPAGE---PSGAQASAGVKALM------DTVALHLNPENG 84

Query: 64  -------LCFINFPEDLLIDGYAEILPKDKVVIEVLENTIPTEKLLSVIRGLREKGYLFA 116
                  L F++   D L     + LP   VV+ + +  +    L S++  L E+G+ F 
Sbjct: 85  GWQLGSMLVFVDVSLDALFQSELQSLPPQSVVLCMSKEDLTDVDLRSMLLLLHEQGFGFM 144

Query: 117 LDDVTRTVFE-NWHDYLSLFDFVKIDTRRIDDDFLKLFFSLKPICCIALAEKVETNEQLE 175
           L        +      ++ F+   +D   +     +      P+  +A   +V T ++ +
Sbjct: 145 LRGAAMLPADPELRAIVTHFEVDALDADTVVRVRQEAQQGHPPVELVA--PRVSTWKEFD 202

Query: 176 SLKKNGFLLFQGFYLDRPKVLRCATTEYANTESFELLIEVIKRDFNPSRLELILIRNPKL 235
           +       +F       P V          +     L+++I+R+ +   +E  L  +  L
Sbjct: 203 ACATRRVNVFIDGAFRNPPVRDVDDALQPESLLIVQLMQMIQRNEDVRAIEAALKHDAAL 262

Query: 236 TVGLLKYVNT--IGKPLKPISSIQHAIVYLGLEQLRMFVFLLCSSTIHDKLDLDKYVYVL 293
           T  LL+Y+N+  +G  ++ I S++HA+  LG   L  ++ LL +++            +L
Sbjct: 263 TYRLLRYINSPSVGVAVE-IHSLRHAVAMLGYSPLYRWLSLLLATSNKASSPFMMKKAIL 321

Query: 294 TRAKFCELM-MGEIDHKLSSMAFISGMLSLSHLFLPNDNSELLSSLPISNDMRDAVLCRA 352
            R +F ELM  G +    S   F++GM SL    L      +L  + +++ ++ A+L R 
Sbjct: 322 -RGRFVELMGQGMLPPSESDNLFVAGMFSLLDQLLGVSMEGVLRKVQLTDSVQQAILSRG 380

Query: 353 GILGDVISASEAY-----QNAKWCEALDFLNKYKIKIDGGLSKLYMDAIEWSSE 401
           G+ G  ++ +E+      Q  +  EAL FL+  ++      +   + A+ WS +
Sbjct: 381 GLYGPFVALAESCELDDGQAPRLAEAL-FLSAAQV------NAAQLSALVWSQD 427