Pairwise Alignments

Query, 410 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., Predicted signal transduction protein containing EAL and modified HD-GYP domains from Enterobacter asburiae PDN3

 Score =  169 bits (428), Expect = 1e-46
 Identities = 116/382 (30%), Positives = 194/382 (50%), Gaps = 13/382 (3%)

Query: 1   MDSFIAKQAITDENLTIVGYELLFRNSEKNRYPEGVSESLATKKIIWQQFVDDTIDRVVE 60
           M  FIA+Q I +  +  V YELLFR+   NR+P+ VS   AT ++I  QF+     R+  
Sbjct: 1   MYGFIARQPIFNPEMKTVAYELLFRDGMTNRFPD-VSAEYATSRMISDQFLCVPSQRIAG 59

Query: 61  SDKLCFINFPEDLLIDGYAEILPKDKVVIEVLENTIPTEKLLSVIRGLREKGYLFALDDV 120
           +    FINFP  ++ID   E L K+ VVIE+LE+ +P  +LL  +R +   GY FALDD 
Sbjct: 60  AHT-SFINFPSRMVIDRSGEALDKESVVIEILEDAVPGAELLQAVREMNAHGYQFALDDF 118

Query: 121 TRTVFENWHDYLSLFDFVKIDTRRIDDDFLKLFFSLKPIC---CIALAEKVETNEQLESL 177
             T+   W  +L     +K D R      +K +   +         LAEK+ET E+    
Sbjct: 119 --TLAPEWDVFLPYISILKFDVRNYTLAQIKQYLKERKHLTGHIKYLAEKIETKEEFSQY 176

Query: 178 KKNGFLLFQGFYLDRPKVLRCATTEYANTESFELLIEVIKRDFNPSRLELILIRNPKLTV 237
           ++ GF LFQG++  RP+V++           F L +EV +   +   +E ++  +  L+ 
Sbjct: 177 REEGFSLFQGYFFCRPEVIKYKRLSQNQLAIFRLQMEVGRNKPDFRIVESLIKTDLTLSY 236

Query: 238 GLLKYV-NTIGKPLKPIS----SIQHAIVYLGLEQLRMFVFLLCSSTIHDKLDLDKYVYV 292
            +++Y+ +T  K +   +    ++   + YLG  QLR FV ++  ++  +    + Y   
Sbjct: 237 KIMRYMKHTAFKHIGACNFSKLTLSEVLRYLGENQLRRFVAVVVLASAGNDTVSELYPLS 296

Query: 293 LTRAKFCELMMGEIDH-KLSSMAFISGMLSLSHLFLPNDNSELLSSLPISNDMRDAVLCR 351
           + R KFCEL+   ++   L+  AF+ G+ SL    L    +EL+  + +   + +A+  +
Sbjct: 297 MMRGKFCELIAETMNEPTLAENAFMCGLFSLLDTLLEQPMAELMKQIAVPQSVSNALCHQ 356

Query: 352 AGILGDVISASEAYQNAKWCEA 373
            G L D++S    Y+  +W EA
Sbjct: 357 EGRLADMVSLCRYYERQQWDEA 378