Pairwise Alignments

Query, 410 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., biofilm formation regulator HmsP from Alteromonas macleodii MIT1002

 Score =  184 bits (468), Expect = 3e-51
 Identities = 124/403 (30%), Positives = 208/403 (51%), Gaps = 10/403 (2%)

Query: 1   MDSFIAKQAITDENLTIVGYELLFRNSEKNRYPEGVSESLATKKIIWQQFVDDTIDRVVE 60
           M +++A+Q I + N  +  YELLFR  E N +P+ +    AT KI+    +   I+ +  
Sbjct: 1   MFAYVARQPIFNVNREVYAYELLFRVGEDNCFPD-IPPDEATSKILTSTHLSLGIEEIT- 58

Query: 61  SDKLCFINFPEDLLIDGYAEILPKDKVVIEVLENTIPTEKLLSVIRGLREKGYLFALDDV 120
            DK  FINF  D L+  +   L   KVVIE++E     + L++  + +R  GY  ALDD 
Sbjct: 59  GDKKAFINFHRDTLMFRFPTSLDASKVVIEIVETVDVDDALVAACKHIRGLGYPIALDDY 118

Query: 121 TRTVFENWHDYLSLFDFVKIDTRRIDDDFLK-LFFSLKPICCIALAEKVETNEQLESLKK 179
                  W  ++     VKID   I  + +  L    K      +AEK+ET E+    K 
Sbjct: 119 DMK--GKWEAFIPFTSIVKIDITEIPHEKIPALVERFKSNKIQLVAEKIETYEEFNKFKD 176

Query: 180 NGFLLFQGFYLDRPKVLRCATTEYANTESFELLIEVIKRDFNPSRLELILIRNPKLTVGL 239
            GF  FQG++L +P+++R      ++    ELL    +   N   +  I+ R+P LT  L
Sbjct: 177 MGFDYFQGYFLAKPEIVRHRKLGPSSLTMMELLTLSSQAKLNFDEVNKIIERDPSLTYLL 236

Query: 240 LKYVNT--IGKPLKPISSIQHAIVYLGLEQLRMFVFLLCSSTIHDKLDLDKYVYVLTRAK 297
           L+++N   + K  K I+S++HA+ ++G  +++ F+ LL  + + D    +     L RAK
Sbjct: 237 LRFINNPLVNKRHK-ITSLKHALTFMGEVEVKKFISLLALANLSDGQPTELMQMALVRAK 295

Query: 298 FCELMMGEIDHKLSSM-AFISGMLSLSHLFLPNDNSELLSSLPISNDMRDAVLCRAGILG 356
           FCEL+  ++      +  F++G+LSL    +     +L+S +PIS+D++DA+    G+L 
Sbjct: 296 FCELVYTQLKGADDPLKGFLTGLLSLLDAMMEQRIDDLVSKVPISDDVKDALCGSPGVLR 355

Query: 357 DVISASEAYQNAKWCEALDFLNKYKIKIDGGLSKLYMDAIEWS 399
           + ++ S+ ++ AKW     F  KY +K    L   Y +AI+W+
Sbjct: 356 NCLTLSQFFERAKWTGIQQFATKYGVK-QSLLHSYYNEAIKWA 397