Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  231 bits (588), Expect = 1e-64
 Identities = 160/512 (31%), Positives = 259/512 (50%), Gaps = 12/512 (2%)

Query: 122 YDPRSRGWYQEAKKNKRIFITEP-YLDTEGKNFLVSISSPVADTMNNFIGAMYFDVDLSR 180
           YDPR+R WY+ A  +    +  P Y   +    LV  +  + +      G     V L  
Sbjct: 137 YDPRTRPWYKAAMASPGKTVRTPAYYYDKDDVALVGTARALLEN-GKAKGVFVVSVSLKN 195

Query: 181 IQKNVDDINLFEAGYVFITSNTGKVIIHSNTDELGKNVKDIYNGF----RLDKGKVVLSV 236
           + + V  I L E+GYV +  +   ++   N     K +K +   +       +G   + +
Sbjct: 196 LTELVKSIKLGESGYVMLVEDGVVLVDPRNAAHNFKPLKGLGAAYAQLAETPQGSTDVVI 255

Query: 237 NGVNKW--LYTSPILGGDWFIIAVIDESIAMQSINKMKYELIFYSAIGLVFGGLILVFIL 294
           +GV+    ++TSP LG  W  I +I+    M    +M Y       + ++  GLI     
Sbjct: 256 DGVHYMANVWTSPGLG--WRYIGLIEHREVMAEATRMTYLTALIVGVLVLIFGLIAAAFS 313

Query: 295 RRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLGSQIRQLKTI 354
           + ++ P+  + + ++ IA G GDL  +L      E +ELA  FN F   +   I+ +   
Sbjct: 314 KVIVKPIGQVSTGLQSIAQGEGDLRHELQVQGKDETAELAGWFNKFLAAIRQLIQHIGAA 373

Query: 355 ASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQVAADAAKEG 414
           ++ + + ++  +  A        +Q + +E ++TA NEM  TA+EVA S   AA++A+ G
Sbjct: 374 SANLQNASKVNSEVAHNMNEAAGRQREAVELVSTAFNEMVATANEVARSCSGAAESAENG 433

Query: 415 ESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVINDIADQTNLLA 474
                EG   +  TTD + RL  R+  S + + EL   +  I  +L  I  IA+QTNLLA
Sbjct: 434 HRRVAEGKQQIEVTTDNVNRLGRRLTESSQAMVELEAGSRSINQILGTIRAIAEQTNLLA 493

Query: 475 LNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKNVSRSMDESK 534
           LNAAIEAARAG+ GRGFAVVADEVR LA+RT  ST +I +++  L+   + V++ M    
Sbjct: 494 LNAAIEAARAGDQGRGFAVVADEVRALAKRTSDSTGEIEQLLGTLENKTQEVTQKMGSCL 553

Query: 535 LETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNNTVNIKDLSI 594
             +   V       +    +Q +++ I D NLQI++AAEEQ  VAEEIN +   I D   
Sbjct: 554 DLSRASVSSIESARDSFEGIQTSVNEIRDQNLQISAAAEEQHSVAEEINRHIQQIYD-EA 612

Query: 595 KLSEAASNAGTEMNAQVSKVKEQ-NELLNEFK 625
           +L E+ +N+  + + ++S + ++ N L+  FK
Sbjct: 613 RLVESLANSAQDDSGRLSNLSDELNGLVGRFK 644