Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  215 bits (547), Expect = 5e-60
 Identities = 130/348 (37%), Positives = 210/348 (60%), Gaps = 3/348 (0%)

Query: 280 AIGLVFGGLILVFILRRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNS 339
           AI LV   L++  I R ++ PL+   +A+ +IASG  DLT+ LDT+   E ++L+  FNS
Sbjct: 199 AIALVMA-LLVSLIARSIVRPLQAAVNAMGNIASGESDLTRSLDTHGQDEVTQLSRHFNS 257

Query: 340 FTEMLGSQIRQLKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASE 399
           FT  L   + QL+  A+ +   +++  + A  +    +QQ Q++E +ATA+NE+     +
Sbjct: 258 FTAKLRQVVGQLQVCANALGQSSQELGSNATQAHDRSQQQSQQMELVATAINEVTYGVQD 317

Query: 400 VANSAQVAADAAKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETV 459
           VA +A+ AA   ++ ++ + +G   +  +   I +LS  I  +VE ++ L   + +I +V
Sbjct: 318 VAKNAEHAASEMRDAQAQAQQGQVNIDSSLQQIDQLSGTISQAVEVIRTLSAESTQIGSV 377

Query: 460 LDVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQL 519
           L+VI  IADQTNLLALNAAIEAARAGE GRGFAVVADEVR LAQRTQ+ST +I  +IE+L
Sbjct: 378 LEVIRSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQKSTAEIQGMIERL 437

Query: 520 QEGAKNVSRSMDESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVA 579
           Q  ++   + + +S   + + +E+  Q    ++ + +++  ++ +N  IASA  +Q+ V 
Sbjct: 438 QGHSEAAVKVISDSHSASQMTIEQAGQAGASLTAIGESLRNLNGLNASIASATLQQAHVV 497

Query: 580 EEINNNTVNIKDLSIKLSEAASNAGTEMNAQVSKVKEQ-NELLNEFKI 626
           E+IN N      LS   + AA  +    +A +  + EQ + LL +FK+
Sbjct: 498 EDINQNVTEAAGLSHSTALAAEQSSV-ASAHLRGLSEQLDGLLRQFKV 544