Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  237 bits (605), Expect = 1e-66
 Identities = 155/481 (32%), Positives = 247/481 (51%), Gaps = 16/481 (3%)

Query: 120 DDYDPRSRGWYQEA-KKNKRIFITEPYLDTEGKNFLVSISSPVADTMNNFIGAMYFDVDL 178
           ++YDPR R WYQ A     +   T  Y        L+     VAD   N +G +  DV L
Sbjct: 135 NNYDPRVRPWYQAAIAAPGKTVRTGAYYWAPDDVTLIGTVHTVADATGNILGVVGLDVSL 194

Query: 179 SRIQKNVDDINLFEAGYVFITSNTGKVIIHSNTD--------ELGKNVKDIYNGFRLDKG 230
            ++ + V +I L ++GY+ +    G V++  +          +LG N  ++    +   G
Sbjct: 195 KQLTELVRNIKLGDSGYLMLVEGNGNVLVDPSDAKHNFKPLADLGPNYAELA---KRGDG 251

Query: 231 KVVLSVNGVNKW--LYTSPILGGDWFIIAVIDESIAMQSINKMKYELIFYSAIGLVFGGL 288
              + ++GV     + +S  LG  W  I +I     M    ++ + +   +A+  +   +
Sbjct: 252 VTQIEIDGVAYMANMVSSKDLG--WRFIGLIKRDEVMAGATRLTWLIAAIAAVLALVFAI 309

Query: 289 ILVFILRRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLGSQI 348
           +       ++ P++ +   +++IA G GDLT++L      E + LA  FN F  M+   +
Sbjct: 310 VGASFASVIVRPIRGVADGLQEIAEGEGDLTRQLKVQGKDETASLAGWFNQFLSMIAQLV 369

Query: 349 RQLKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQVAA 408
           +++   +S +   A  T   A        +Q + +E ++TA NEM  TA+EVA S   AA
Sbjct: 370 QRIGNASSDLQSAAADTREVAHNMNQAAGRQREAVELVSTAFNEMVATANEVARSCSAAA 429

Query: 409 DAAKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVINDIAD 468
            +A EG     +G   + E T ++ +LS  +  S + +++L + +  I T+LD I  IA+
Sbjct: 430 TSADEGYRDVHDGQQHIGEATGSVLKLSEDLQRSTQTMQQLEQDSKNINTILDTIRSIAE 489

Query: 469 QTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKNVSR 528
           QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA+RT  ST +I  ++  L    + V++
Sbjct: 490 QTNLLALNAAIEAARAGDQGRGFAVVADEVRALARRTADSTGEIDSLLGNLARRTQEVTQ 549

Query: 529 SMDESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNNTVN 588
            M  S L +   VE+  Q  +    ++ ++  I D N QIA+AAEEQ  VAEEIN +   
Sbjct: 550 QMQGSLLVSHTSVERIQQARDSFDKIRGSVDSIRDQNTQIATAAEEQHQVAEEINRHIAQ 609

Query: 589 I 589
           I
Sbjct: 610 I 610