Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  252 bits (643), Expect = 4e-71
 Identities = 155/388 (39%), Positives = 235/388 (60%), Gaps = 11/388 (2%)

Query: 250 GGDWFIIAVIDESIAMQSINKMKYEL--------IFYSAIGLVFG--GLILVFILRRLMS 299
           G  W ++  + E + +     +K ++        +    +GL+    GLILV+++ R ++
Sbjct: 328 GKPWGVLLDVPEKVLVGPAEALKAQMDAENTRGTLLELGLGLLAAVVGLILVWLMARSVT 387

Query: 300 -PLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLGSQIRQLKTIASGV 358
            P+  +   ++DIASG GDLT++L  +   E  +LA  FN F + L   I ++K      
Sbjct: 388 RPILGVAHMLEDIASGEGDLTRRLAYDKQDELGQLAGWFNRFLDKLQPIIAEVKRSVQDA 447

Query: 359 LDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQVAADAAKEGESAS 418
              A+++A  A  +   +EQQ ++++Q+ATA +EM+ TA +VA SA  AA AA++ + A+
Sbjct: 448 RGTADQSAAIATQTSAGMEQQYRQVDQVATASHEMSATAQDVARSAAQAAQAARDADQAT 507

Query: 419 LEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVINDIADQTNLLALNAA 478
            +G +V+  TT  I  L+  + +++  V+ L   +++I +VL+VI  IA+QTNLLALNAA
Sbjct: 508 RDGLTVIEHTTHNIGALASDMSTAMTQVEGLAANSEKIGSVLEVIRGIAEQTNLLALNAA 567

Query: 479 IEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKNVSRSMDESKLETD 538
           IEAARAGE+GRGFAVVADEVR LAQRTQ+S  +   +IE LQ G + V  SM  S  +  
Sbjct: 568 IEAARAGEAGRGFAVVADEVRNLAQRTQESVEETRLVIEHLQNGTEAVVGSMGNSYRQAQ 627

Query: 539 IVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNNTVNIKDLSIKLSE 598
             VE+  Q    +  +  A+  ISDMNLQIASAAEEQS VAEEINNN   I+D++  LSE
Sbjct: 628 GSVEQVGQAVTALRQIGDAVTVISDMNLQIASAAEEQSAVAEEINNNVATIRDVTESLSE 687

Query: 599 AASNAGTEMNAQVSKVKEQNELLNEFKI 626
            A+ +     A  S   +Q  L+++F++
Sbjct: 688 QANESARVSQALNSLANQQQGLMDQFRV 715