Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  521 bits (1342), Expect = e-152
 Identities = 285/623 (45%), Positives = 403/623 (64%), Gaps = 2/623 (0%)

Query: 5   FVKKLIFISSFILLVTVAFVVWEGYTTAKKEVSVVIEDGINEIINKTERFVSLKLESDIS 64
           F  K++  SS +LL TVA +    Y   + E+  ++ D ++EI++   +  +  +    S
Sbjct: 3   FSHKIVAASSVLLLATVALLSGSQYFKVRDEIRSMVSDSVDEIVDGVSKTTAEVINGRKS 62

Query: 65  LASSIVDSISLRISDEQYINDIINGNAIKKAFLSTGFGFDSNGKVIENDPNWEPEDDYDP 124
           +A      I      +  +  II+   IK  FL  GFG + +G  I NDP+W P   +DP
Sbjct: 63  IAQYATSLIENNPEPDN-VRTIISQPLIKNTFLLVGFGLEKDGSNINNDPSWNPGPTWDP 121

Query: 125 RSRGWYQEAKKNKRIFITEPYLDTEGKNFLVSISSPVADTMNN-FIGAMYFDVDLSRIQK 183
           R R WY++AK   ++ IT PY D+     LVS+++PV D+    F+G++++DV L+ + +
Sbjct: 122 RVRPWYKDAKNAGKLVITAPYADSASGEILVSVATPVKDSATGQFLGSIFYDVSLAELAE 181

Query: 184 NVDDINLFEAGYVFITSNTGKVIIHSNTDELGKNVKDIYNGFRLDKGKVVLSVNGVNKWL 243
            V+++ LF+AGYVFI S  G  I H   +  GK + +     +++     + +NG    +
Sbjct: 182 LVNEVKLFDAGYVFIVSEDGTTIAHPKKEFNGKPMSEFLGESKINVDTHQVIINGKPYAV 241

Query: 244 YTSPILGGDWFIIAVIDESIAMQSINKMKYELIFYSAIGLVFGGLILVFILRRLMSPLKT 303
             S + G DW++  VIDE IA  ++++++   + ++ I LV    +L+FI+R LM PL T
Sbjct: 242 SFSDVEGEDWYVGVVIDEEIAYAALDELRRSTLIFTVIALVISVFVLLFIVRVLMKPLDT 301

Query: 304 LDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLGSQIRQLKTIASGVLDGAE 363
           L+ AI+++ASG GDLT++L TN D+EF++LA+GFN+FTE L  Q+ Q K I + +L G+E
Sbjct: 302 LNDAIQNVASGEGDLTQRLSTNTDEEFAKLAIGFNTFTETLQKQLIQSKAIGAEILRGSE 361

Query: 364 KTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQVAADAAKEGESASLEGSS 423
            T+   + S   +  QL ELEQLATAM+EMA T+S+VAN+AQ AA AAK  + A+  G+ 
Sbjct: 362 STSMTLQQSAEAMRSQLHELEQLATAMHEMATTSSDVANNAQGAASAAKVADDAAAAGTD 421

Query: 424 VVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVINDIADQTNLLALNAAIEAAR 483
           VV +TT AI  LS  I ++V+DVK L  AT  IETVL VINDIADQTNLLALNAAIEAAR
Sbjct: 422 VVTKTTKAIDTLSATIDAAVDDVKVLESATANIETVLKVINDIADQTNLLALNAAIEAAR 481

Query: 484 AGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKNVSRSMDESKLETDIVVEK 543
           AGESGRGFAVVADEVRTLAQRTQQST +I  +IE+LQ GA  V+ +M  SK      V +
Sbjct: 482 AGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEKLQSGANAVAVAMSHSKDTAASAVNQ 541

Query: 544 TNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNNTVNIKDLSIKLSEAASNA 603
               NE +  ++ AI +ISDMN+QIASAAEEQSLVAEEINNNTV IKDLS +++E+A  A
Sbjct: 542 AQGANEALEKIRLAIQQISDMNIQIASAAEEQSLVAEEINNNTVKIKDLSDQVAESADEA 601

Query: 604 GTEMNAQVSKVKEQNELLNEFKI 626
              M  Q   ++EQ+ +LN+FK+
Sbjct: 602 NMSMQIQTENIREQDAILNKFKV 624