Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  221 bits (562), Expect = 1e-61
 Identities = 156/506 (30%), Positives = 264/506 (52%), Gaps = 36/506 (7%)

Query: 150 GKNFLVSISSPVADTMNNFIGAMYFDVDLSRIQ----KNVDDINLFEA-GYVFITSNTGK 204
           G+    S+S P+   + + +   ++ +DL+           D NLF+  G V I S    
Sbjct: 207 GRYLATSLSVPI---LIDGVAIGFYGIDLTLAPLIGITQKSDNNLFDGQGKVSIVSENNA 263

Query: 205 VIIHSNTDELGKNVKDIYNGFRLDKGKV--VLSVNGVN-------KWLYT-SPI--LGGD 252
           ++    +D     + + +    L +  V  +L    VN       +WL   +PI     +
Sbjct: 264 LVA---SDAAFLTLGETFQSENLSRSTVSSLLQAGQVNTQWSEDGQWLVVFAPIKVANQN 320

Query: 253 WFIIAVIDESIAMQSINKMKYEL-----------IFYSAIGLVFGGLILVFILRRLMSPL 301
           W II  +     MQ   ++   L           +    + +V G L++  +  RL+ P+
Sbjct: 321 WGIIFEMPRQSVMQDAEQLDILLTEQLERGIRSELMVGTLMVVVGLLVVTLMAMRLVRPI 380

Query: 302 KTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLGSQIRQLKTIASGVLDG 361
           + +   ++DI+SG GDLT++L  N   E  +LA GFN F + L   IR++      V+  
Sbjct: 381 RAVAERLQDISSGEGDLTQRLQVNSADEIGQLAQGFNLFMDKLQPIIRRVVDNTGQVVST 440

Query: 362 AEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQVAADAAKEGESASLEG 421
            E+  +  E +R   E Q +E++ +ATA  EM  T++ V  +AQ A +AA + + A+  G
Sbjct: 441 TEQVKSTVESTRRSSEAQFKEVDSVATAAEEMTQTSAHVVENAQRAVNAASDAQRAAQTG 500

Query: 422 SSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVINDIADQTNLLALNAAIEA 481
             V+  +   + +L  R+  +V  V+EL +    I  +L VI  I++QTNLLALNAAIEA
Sbjct: 501 DEVIRHSQMQMNQLVDRMNLAVPVVEELARNNTGIIEILSVIEGISEQTNLLALNAAIEA 560

Query: 482 ARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKNVSRSMDESKLETDIVV 541
           ARAGE GRGFAVVADEVR+LA RTQ S  +I  +I +++ G ++V +++  S        
Sbjct: 561 ARAGEQGRGFAVVADEVRSLASRTQASVGEIRSVINKVELGTQDVVKAIQGSNETAQATA 620

Query: 542 EKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNNTVNIKDLSIKLSEAAS 601
           E+      +++ V  AIH I++M+ QI  AA++Q  V+ ++  + VNI+DLS ++  + +
Sbjct: 621 EQVADAVTQLNRVFSAIHAINEMSHQIVQAAQDQQTVSAQVTQSVVNIRDLSAQIL-SET 679

Query: 602 NAGTEMNAQVSKVK-EQNELLNEFKI 626
            A  ++  Q++++  EQ  L+ +FK+
Sbjct: 680 EASEKVGEQIARLSFEQQTLVGQFKV 705