Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  208 bits (529), Expect = 6e-58
 Identities = 164/616 (26%), Positives = 289/616 (46%), Gaps = 56/616 (9%)

Query: 16  ILLVTVAFVVWEGYTTAKKEVSVVIEDGINEIINKTERFVSLKLESDISLASSIVDSISL 75
           +++  ++  +   Y +    +S  I+   ++ I      +  KLE++++   ++  S++ 
Sbjct: 13  LIIAIISLTIITSYFSVNYFISDYIKQADSQNITHNIDLMQRKLENELNSKLALAQSLNF 72

Query: 76  RISDEQYINDIINGNAIKKAFLSTGFGFDSNGKVIENDPNWEPEDDYDPRSRGWYQEAKK 135
            + D          N I K  +  G+ FD  G + E D                      
Sbjct: 73  SMMDIGETKASSGFNKIIK--IVNGYAFDDTGNMSEED---------------------- 108

Query: 136 NKRIFITEPYLDTEGKNFLVSISSPVADTMNNFIGAMYFDVDLSRIQKNVDDINLFEAGY 195
                  + Y+     +    + SPV  T N     + F V   R  ++VD        +
Sbjct: 109 ------AQQYVSLAENHGDAVVVSPV--TFNEGQPTITFSV--KRFDESVDF-------F 151

Query: 196 VFITSNTGKVIIHSNTDELGKNVKDIYNGFRLDKGKVVLSVNGVNKWLYTSPI--LGGDW 253
           VF  S   +++    T+  G   + + NG  +   K     +GVN    T PI   G DW
Sbjct: 152 VFNLSAFSQMMTDYATE--GSFAELMANGNVIFSDK-----HGVNLTPITRPINFAGQDW 204

Query: 254 FIIAVIDESIAMQSINKMKYELIFYSAIGLVFGGLILVFILRRL---MSPLKTLDSAIKD 310
            +I  ID +    + +++ +++       LV   +I+V  +  L     PL  L++ + +
Sbjct: 205 QLIGYIDLTAIQANTDQLNWKITLAL---LVCASVIIVASVTMLHVSFKPLSRLNTLVAN 261

Query: 311 IASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLGSQIRQLKTIASGVLDGAEKTANEAE 370
           ++ G GDLT++L      E  ++    N F E L      +   +  +       +N+A 
Sbjct: 262 LSQGNGDLTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAVVHLSNQAR 321

Query: 371 VSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQVAADAAKEGESASLEGSSVVHETTD 430
            +   + Q  QE EQ  TA+ EM+ +A  +A SA  AA   +     + E    V E  +
Sbjct: 322 SNLNTLNQHTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAVN 381

Query: 431 AIQRLSIRIGSSVEDVKELVKATDRIETVLDVINDIADQTNLLALNAAIEAARAGESGRG 490
           ++  L  ++ S  E +  + + T +I +VL VI  IA+QTNLLALNAAIEAARAGE GRG
Sbjct: 382 SVNGLVNQVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGRG 441

Query: 491 FAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKNVSRSMDESKLETDIVVEKTNQVNEK 550
           FAVVADEVR LA RTQQST QI++++  L+   +NV + MD +++  +   E+TN V + 
Sbjct: 442 FAVVADEVRALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMDS 501

Query: 551 ISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNNTVNIKDLSIKLSEAASNAGTEMNAQ 610
           +++V  ++  ++++N  IA++A EQ  V  E++ N   I+++  KL+  A+   +  N  
Sbjct: 502 LNVVTDSVAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNEL 561

Query: 611 VSKVKEQNELLNEFKI 626
            +     ++++  F++
Sbjct: 562 QNTSHALSDVVGRFRV 577