Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  276 bits (707), Expect = 1e-78
 Identities = 198/642 (30%), Positives = 327/642 (50%), Gaps = 31/642 (4%)

Query: 1   MNVGFVKKLIFISSFILLVTVAFVVWEGYTTAKKEVSVVIEDGINEIINKTERFVSLKLE 60
           M +    KLI  S   ++V    + W   +  +++ S  +    + I +   + +S    
Sbjct: 5   MKLTLKHKLIGASLSAVVVMATALTWFSASQLQQQTSNAVYTRADAISSTAAKGIS---- 60

Query: 61  SDISLASSIVDSISLRISDEQ---YINDIINGNAIKKAFLSTGFGFDSNGKVIENDPNWE 117
             IS+  SI  + +  I  +    Y+    N       F  T     ++G +  + P   
Sbjct: 61  DWISIRKSISTAFNAHIEAQNVVPYLQQARNAGGFDDIFYGT-----TDGAMYRSHPE-R 114

Query: 118 PEDDYDPRSRGWYQEAKKNKRIFITEPYLDTEGKNFLVSISSPVADTMNNFIGAMYFDVD 177
              DYDPR+R WY++A    +  IT  Y D      LV+I+ PV     N  G +  DV 
Sbjct: 115 NRADYDPRTRPWYKDAASAGKQIITTAYSDAITGALLVTIAEPVR-LNGNMSGVVGADVL 173

Query: 178 LSRIQKNVDDINLFEAGY----VFITSNTGKVIIHSNTDELGKNVKDIYNGFRL------ 227
           + ++   + D+   +AG     + I    G  + H +   L K V  + +   +      
Sbjct: 174 IDQL---IADVISMDAGKNAQTMLIDGQNGSFLAHPDKSLLLKPVTTLSSALDMRTIERA 230

Query: 228 -DKGKVV-LSVNGVNKWLYTSPILGGDWFIIAVIDESIAMQSINKMKYELIFYSAIGLVF 285
            ++G+++ L +NGV K+ + + +    W+    +D      S +++   LI  + +  V 
Sbjct: 231 ANQGELLALKLNGVEKFFFFTAVPDTPWYFAVQMDSDTEYASHSELLTGLITTALLITVI 290

Query: 286 GGLILVFILRRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLG 345
             +I+ +++  L   L  +  A+++IASG  DLT++L+   D E  +LA  FN+F   + 
Sbjct: 291 VVVIVSWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMH 350

Query: 346 SQIRQLKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQ 405
           + + +L  +++ +   ++ TA +AE     +  Q  E+  +ATA+NEMA    E+A +A 
Sbjct: 351 TMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNAD 410

Query: 406 VAADAAKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVIND 465
             A  A E  +A + G+  V +T  +IQ L+  +  + E ++EL     +I T+L  I +
Sbjct: 411 HTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQN 470

Query: 466 IADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKN 525
           IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR L+QRT  ST +I ++IE LQ     
Sbjct: 471 IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGK 530

Query: 526 VSRSMDESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNN 585
               MD+S+   D  V+  N+ +  +  + + + RISDM  QIASAAEEQ+ V  EI  N
Sbjct: 531 AVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRN 590

Query: 586 TVNIKDLSIKLSEAASNAGTEMNAQVSKVK-EQNELLNEFKI 626
           TV I+D+S  L++ A +A  E  A++S++  E  + +  FK+
Sbjct: 591 TVGIRDVSNDLAQEAHSA-AEQAAELSELSHELEQEIRRFKL 631