Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  208 bits (529), Expect = 6e-58
 Identities = 150/464 (32%), Positives = 238/464 (51%), Gaps = 32/464 (6%)

Query: 194 GYVFITSNTGKVIIHSNTDEL-GKNVKDIY--NGFRLDKGKVVLSVNGVNKWLYTS---- 246
           GY F   + G   +H+   EL GKN+  +   NG  +  G +  S  G + +LY S    
Sbjct: 102 GYFFAYDSQGVNTLHAIKPELEGKNLYGMKDENGVAVIAGLIDASKTG-DGFLYFSWHKP 160

Query: 247 ------PILG-------GDWFI-----IAVIDESIAM------QSINKMKYELIFYSAIG 282
                 P LG        DW +     I  +D  +A         +       I  S +G
Sbjct: 161 TINAQAPKLGYAEYLPKWDWVLGTGIYIDDVDTQVAEFRAQREADLYDQMISAIGLSVVG 220

Query: 283 LVFGGLILVFILRRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTE 342
           LVF  + +  ++ R ++PL+ + S+++ +A+GGGDLT ++      E  ++A  FN+F +
Sbjct: 221 LVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGGDLTARIKVESQDEIGDVAKAFNAFMD 280

Query: 343 MLGSQIRQLKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVAN 402
            L   +  ++  A+ V   A++   +   +   ++    E +++  A+ EM+ TA EVA+
Sbjct: 281 KLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVVAAVTEMSATAREVAS 340

Query: 403 SAQVAADAAKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDV 462
           +    A A +   S        V+   D I  L   +  +   V +L +   +I  VL V
Sbjct: 341 NTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLSQQAAKITQVLKV 400

Query: 463 INDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEG 522
           I DIA+QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ ST +I E++  L +G
Sbjct: 401 IGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTKEIGEMLNALHQG 460

Query: 523 AKNVSRSMDESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEI 582
                +SM+ S+   +    ++ Q+ E ++ + +A+  I DM +Q ASAAE+QS VAE+I
Sbjct: 461 VSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQTASAAEQQSAVAEDI 520

Query: 583 NNNTVNIKDLSIKLSEAASNAGTEMNAQVSKVKEQNELLNEFKI 626
           N N V I+ +  +LSE+     +   +     ++   L+  FK+
Sbjct: 521 NQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGHFKL 564