Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

 Score =  293 bits (749), Expect = 2e-83
 Identities = 196/636 (30%), Positives = 327/636 (51%), Gaps = 18/636 (2%)

Query: 1   MNVGFVKKLIFISSFILLVTVA-FVVWEGYTTAKKEVSVVIEDGINEIINKTERFVSLKL 59
           MN+ F  K++  +  ++++  A F ++  Y          I   I   + ++    +  +
Sbjct: 16  MNLKFRHKILLSACGVVVLAFALFTLYNDYLQRN-----TIRQNIEASVQQSGALTASSV 70

Query: 60  ESDISLASSIVDSISLRISDE---QYINDIINGNAIKKAFLSTGFGFDSNGKVIENDPNW 116
           ++ +S    ++++++  I  +     +  +I   +  + FL T  G  +NG+  +  P+ 
Sbjct: 71  QNWMSGRILVLENLAQDIGQQGAGDTLAGLIEQPSYTRNFLFTYLG-QANGEFTQR-PDA 128

Query: 117 EPEDDYDPRSRGWYQEAKKNKRIFITEPYLDTEGKNFLVSISSPVADTMNN-FIGAMYFD 175
           +    YDPR R WY  A    +  +T PY    G   +V+I++PV    N   IG +  D
Sbjct: 129 QMPAGYDPRQRPWYGAAANAGQTVLTAPYQGAVG-GLMVTIATPVKSKRNGELIGVVGGD 187

Query: 176 VDLSRIQKNVDDINLFEAGYVFITSNTGKVIIHSNTDELGKNVKDIYNG--FRLDKGKVV 233
           V L  + + ++ ++    G+ F+    G+VI+  N D++ KN+KDIY G   R+  G   
Sbjct: 188 VTLDTLVEIINSVDFGGIGHAFLADANGQVIVSPNKDQVMKNLKDIYPGSNLRVAAGMQD 247

Query: 234 LSVNGVNKWLYTSPILG---GDWFIIAVIDESIAMQSINKMKYELIFYSAIGLVFGGLIL 290
           ++++G ++ +  +P+ G     W+I   ID   A  ++++ +   I    I +     +L
Sbjct: 248 VTLDGQDRIISFAPVAGLPSAQWYIGLSIDRDKAYAALSQFRTSAIIAMLIAVAAIAGLL 307

Query: 291 VFILRRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLGSQIRQ 350
             ++  LMSPL T+  A++DIA G GDLT++L      EF ELA  FN F E + + I +
Sbjct: 308 GLLIPVLMSPLTTMGRAMRDIAEGEGDLTRRLAVQNKDEFGELATSFNRFVERIHASISE 367

Query: 351 LKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQVAADA 410
           + +    V D +EK  + +  S +  E+Q      +A A+NE+     E+A +A  A+  
Sbjct: 368 VSSATRLVHDLSEKVVSASNASIIGSEEQSMRTNSVAAAINELGAATQEIARNAADASQH 427

Query: 411 AKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVINDIADQT 470
           A      +  G  VV E   A+  LS RI  S   ++ L  +TD I  +LDVI  I+ QT
Sbjct: 428 ASGASEQAHGGREVVEEAISAMTALSQRISESCAQIETLNASTDEIGKILDVIKGISQQT 487

Query: 471 NLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKNVSRSM 530
           NLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQ+S  +I  +I  LQ G++    +M
Sbjct: 488 NLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHRMITSLQVGSREAVHTM 547

Query: 531 DESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNNTVNIK 590
           + S++ ++  V+  NQ  E+++ V Q I  I  MN  +A+A EEQ+ V E +N +   I 
Sbjct: 548 NTSQVSSEQTVQVANQAGERLASVTQRIGEIDGMNQSVATATEEQTAVVESLNLDITQIN 607

Query: 591 DLSIKLSEAASNAGTEMNAQVSKVKEQNELLNEFKI 626
            L+ +  E  +      +    +     +L+  F+I
Sbjct: 608 ALNQQGVENLNETLRHCDQLAQQAGRLKQLVGSFRI 643