Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 624 a.a., Methyl-accepting chemotaxis protein PctA from Pseudomonas putida KT2440

 Score =  288 bits (737), Expect = 5e-82
 Identities = 192/631 (30%), Positives = 326/631 (51%), Gaps = 22/631 (3%)

Query: 5   FVKKLIFISSFILLVTVA-FVVWEGYTTAKKEVSVVIEDGINEIINKTERFVSLKLESDI 63
           F  K++  +S I+++  + F ++  Y   +  +   +E+ + E+   T   +    E  I
Sbjct: 7   FSHKILLAASLIVILAFSLFTLYNDYLQ-RNAIREDLENYLAEMGASTSTNIRNLFEGRI 65

Query: 64  SLASSIVDSISLRISDEQYINDIINGNAIKKAFLSTGFGFDSNGKVIENDPNWEPEDDYD 123
            L  ++  +I+    D      ++  NA+  +FL+   G    G  +   P+ +  D YD
Sbjct: 66  KLVENLAQNIA---QDPANAETLMGQNALISSFLTVYLGKVDGGFSVR--PDAKMPDGYD 120

Query: 124 PRSRGWYQEAKKNKRIFITEPYLDTEGKNFLVSISSPVADTMNNFIGAMYFDVDLSRIQK 183
           PR+R WY++        +TEPY+D      ++ I S V+ +    +G +  D+ L  + +
Sbjct: 121 PRTRPWYKDGMNASGATLTEPYIDMTTNKMVIGILSKVSSS----VGVVGGDLALDGLVQ 176

Query: 184 NVDDINLFEAGYVFITSNTGKVIIHSNTDELGKNVKDIYNGF--RLDKGKVVLSVNGVNK 241
            ++ +N    GY F+ ++ GK+++H + D + K++ D++     +L      +  +G  +
Sbjct: 177 IINSLNFGGMGYAFLVNDQGKILVHPDKDLVMKSLSDLFPQHTPKLTGELTEVQSDGQTR 236

Query: 242 WLYTSPILG---GDWFIIAVIDESIAMQSINKMKYELIFYSAIGLVFGGLILVFILRRLM 298
            L  SPI G    +W+I   +D+  A   ++  +   +  + + +V    +L  ++R LM
Sbjct: 237 LLTFSPITGLPSANWYIGLSVDKDKAFSMLSTFRTSAVIATVVAVVIIIGLLGLLIRVLM 296

Query: 299 SPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLGSQIRQLKTIASGV 358
            PL T+  A++DIA G GDLTK+L  +   EF  L   FN F E + S IR++ +    V
Sbjct: 297 QPLHTMTRAMEDIAEGEGDLTKRLHIHSHDEFGVLGNAFNRFVERIHSSIREVSSATEQV 356

Query: 359 LDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQVAADAAKEGESAS 418
            + A +  + +  S    ++Q      +A A+NE+   A E+A +A  A+  A      +
Sbjct: 357 NEVALRVISASNSSMTNSDEQSNRTNSVAAAINELGAAAQEIAGNAAQASQHASSARLLA 416

Query: 419 LEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVINDIADQTNLLALNAA 478
            EG  VV     A+ RLS  I +S   ++ L   T  I  +L+VI  I+ QTNLLALNAA
Sbjct: 417 EEGQQVVERNIAAMNRLSDLIVTSSAHIETLNSKTVNIGQILEVITSISQQTNLLALNAA 476

Query: 479 IEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKNVSRSMDESKLETD 538
           IEAARAGE+GRGFAVVADEVR LA RTQ+S  Q+  +IE+LQ GA+    +M++S+  + 
Sbjct: 477 IEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQTMIEELQVGARESVDTMEQSQRHSQ 536

Query: 539 IVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNNTVNIKDLS---IK 595
             ++  NQ  E++  V   I  I  MN  +A+A EEQ+ V E IN +   I  L+   ++
Sbjct: 537 DSMQIANQAGERLDSVTVRIGEIDGMNQSVATATEEQTAVVEAINMDINEINMLNQEGVE 596

Query: 596 LSEAASNAGTEMNAQVSKVKEQNELLNEFKI 626
             +A   A +++  Q  ++K    L+  F+I
Sbjct: 597 NLQATLRACSDLEQQAGRLK---HLVGSFRI 624