Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  251 bits (641), Expect = 7e-71
 Identities = 181/516 (35%), Positives = 285/516 (55%), Gaps = 31/516 (6%)

Query: 129 WYQEAKKNKRIFITEPYLD-TEGKNFLV-SISSPVADTMNNFIGAMYFDVDLSRIQK-NV 185
           W    +   R  + EPYLD   G+  L+ SI+ P+ +     +G +  D+ L+ +Q+ +V
Sbjct: 186 WLTCPQDTARTCMLEPYLDEVNGRQVLMTSIALPLLEH-GKVVGVVGLDIGLANLQQLSV 244

Query: 186 DDI-NLFEA-GYVFITSNTGKVIIHSNTDE-LGKNV-KDIYNGFRLDKGKVVLSVNGVNK 241
           +   +LF+  G V I +  G +  +S  D  LGK + K + +G      +V      +  
Sbjct: 245 NGRRDLFDGQGQVSIATAAGLLAGNSRDDSVLGKPMDKSVADGLL----RVAHPFTPIPD 300

Query: 242 WLYTSPILGGDWFIIAVIDESIAMQSINKMKYELIFYS----------AIGLVFGGLILV 291
              T+P     W ++  + ES+       +   L  ++           +G    GL+LV
Sbjct: 301 ---TAP-----WQVVLELPESVLQAPAVALNQRLDAHNQNANLTSLLIGLGTAIAGLLLV 352

Query: 292 FILRR-LMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLGSQIRQ 350
           ++  R +  P+  + + ++DIASG GDLT++LD     E  +L   FN F + L   I Q
Sbjct: 353 WLTARGVTRPILAVAARLEDIASGEGDLTRRLDYAHQDELGQLTGWFNRFLDKLQPVIAQ 412

Query: 351 LKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQVAADA 410
           +K       + A+++A  A  +   ++QQ +E+EQ+ATA NEM+ TA +VA++A  AA A
Sbjct: 413 VKGSLQEARNTADQSAAIASQTSDGMQQQHREIEQVATAANEMSATALDVAHNASQAAQA 472

Query: 411 AKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVINDIADQT 470
           A+  + AS EG  +V  T   I RL+  + +++++ + L   + +I +VL+VI  IA+QT
Sbjct: 473 ARAADQASQEGLQLVDSTRQGIDRLAAGMNTAMDEARALEDRSGQIGSVLEVIRTIAEQT 532

Query: 471 NLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKNVSRSM 530
           NLLALNAAIEAARAGE+GRGFAVVADEVR LAQRTQ S  +I ++IE LQ+G ++V  +M
Sbjct: 533 NLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQVSVEEIRQVIEGLQQGTQDVVGAM 592

Query: 531 DESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNNTVNIK 590
              + +      +  Q    +  + +A+  ISDMNLQIASAAEEQS VAEE+N N   I+
Sbjct: 593 HAGQRQAQDSAARMEQALPALQRIGEAVAVISDMNLQIASAAEEQSAVAEEVNRNVAGIR 652

Query: 591 DLSIKLSEAASNAGTEMNAQVSKVKEQNELLNEFKI 626
           D++  L+  A  +     A      +Q  L+ +F++
Sbjct: 653 DVTESLAGQADESARISQALNRLANQQQALMEQFRV 688