Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  230 bits (587), Expect = 1e-64
 Identities = 176/610 (28%), Positives = 287/610 (47%), Gaps = 21/610 (3%)

Query: 16  ILLVTVAFVVWEGYTTAKKEVSVVIEDGINEIINKTERFVSLKLESDISLASSIVDSISL 75
           IL+V + F V     T +  V   +   I  I N  ER +   L +   +A + +    L
Sbjct: 24  ILVVVIIFTVALNRLTDRYLVDTALPASIEAIRNDIERMLGQPLVAAADIAGNTLLRDWL 83

Query: 76  RISDE-----QYINDIINGNAIKKAFLSTGFGFDSNGKVIENDPNWEPEDDYDPRSRGWY 130
              ++     Q+I  +        AF +T F     G     +         +P+ + +Y
Sbjct: 84  AAGEDPAQAPQFIEYLTAAKQRNHAF-TTLFASTETGHYYNENGLDRTLSRSNPKDKWFY 142

Query: 131 QEAKKNKRIFITEPYLDTEGKNFLVSISSPV-ADTMNNFIGAMYFDVDLSRIQKNVDDIN 189
                    FI    +D +G    +++      +     +G     + ++ + K + D +
Sbjct: 143 GYIDSGAERFIN---IDIDGATGELALFIDYRVEKEGKLVGVAGMGLRMTELSKLIHDFS 199

Query: 190 LFEAGYVFITSNTGKVIIHSNTDELGKNVKDIYNGFRLDKGKVV---------LSVNGVN 240
             E G VF+  N G + +H +    GK       G    KG +           S +G  
Sbjct: 200 FGEHGKVFLVRNDGLIQVHPDAAFSGKRQLAEQLGADAAKGVMTGGESLRSSRFSRDGER 259

Query: 241 KWLYTSPILGGDWFIIAVIDES-IAMQSINKMKYELIFYSAIGLVFGGLILVFILRRLMS 299
                 P+   +W ++A + ES I  Q    +    +   A+ LV   L++V + R L+ 
Sbjct: 260 YLALGLPLRDLNWTLVAEVPESEIYAQMHQAVWLTSLIGGAVALV-SLLLVVLLARGLVR 318

Query: 300 PLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLGSQIRQLKTIASGVL 359
           P++ + +A+  I SG GDL+ +LD +   E  +LA GFN F +   S I ++ + +  + 
Sbjct: 319 PIRRVTAALVQIGSGAGDLSHRLDDSRQDELGDLARGFNRFLDSQRSLIGEVLSTSERLR 378

Query: 360 DGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQVAADAAKEGESASL 419
              E+     + +     +Q +  E +ATA++EM +T  ++A +A  AA A++     +L
Sbjct: 379 RAVEQVTQVVDNTAERSGRQQEMTEMVATAVHEMGLTVQDIARNAGDAAQASQSARDEAL 438

Query: 420 EGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVINDIADQTNLLALNAAI 479
           +   VV  +   I+ +S  IG + + V +L      ++ VL VI  I++QTNLLALNAAI
Sbjct: 439 QAREVVQRSIRGIEGMSGDIGKAADAVSQLADEVASVDEVLAVIRSISEQTNLLALNAAI 498

Query: 480 EAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKNVSRSMDESKLETDI 539
           EAARAGE GRGFAVVADEVRTLA+RTQ ST ++ ++I++L+ GA +   SM   +  T  
Sbjct: 499 EAARAGEMGRGFAVVADEVRTLARRTQLSTDEVQQMIQRLKLGAGSAVSSMQAGQQATGS 558

Query: 540 VVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNNTVNIKDLSIKLSEA 599
            VE + +    +S +   +  ISDMN Q+A+A EEQS V EEIN     I DL+ + +  
Sbjct: 559 GVESSQRTGASLSAITDQVEHISDMNHQVATATEEQSAVTEEINRTVQGISDLARETAAE 618

Query: 600 ASNAGTEMNA 609
                 E  A
Sbjct: 619 VQGCREECQA 628