Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Methyl-accepting chemotaxis protein PctA from Pseudomonas lactucae CFBP13502

 Score =  296 bits (758), Expect = 2e-84
 Identities = 191/634 (30%), Positives = 336/634 (52%), Gaps = 17/634 (2%)

Query: 2   NVGFVKKLIFISSFILLVTVA-FVVWEGYTTAKKEVSVVIEDGINEIINKTERFVSLKLE 60
           N+ F  K++  +S I++V  + F ++  Y   +  +   +   ++E+ + T   +   L 
Sbjct: 4   NLRFSHKILLAASLIVIVAFSLFTLYNDYLQ-RNAIRDDLNSYLHEMSDVTANSIQTWLS 62

Query: 61  SDISLASSIVDSISLRISDEQYINDIINGNAIKKAFLSTGFGFDSNGKVIENDPNWEPED 120
             I+L  +   +I++   +   +  +++   +  +F++T  G DS G      P+ +  D
Sbjct: 63  GRIALVENAAQNIAIN-PEPAVVASLLDQKTLTSSFMATYVG-DSKGAFTIR-PDTKMPD 119

Query: 121 DYDPRSRGWYQEAKKNKRIFITEPYLDTEGKNFLVSISSPVADTMNNFIGAMYFDVDLSR 180
            +DPR R WY+ A+ +    +TEPY+D      ++SI++P +   +  +G +  D+ L  
Sbjct: 120 GFDPRVRPWYKGAQASNGSTLTEPYIDAATGKLIISIATP-STRASEAVGVVGGDLSLQT 178

Query: 181 IQKNVDDINLFEAGYVFITSNTGKVIIHSNTDELGKNVKDIY--NGFRLDKGKVVLSVNG 238
           +  N+  +     GY F+ S  GKV++H + + + K + D+Y  N  ++      +  NG
Sbjct: 179 LVDNIGALKFGGMGYAFLVSADGKVLVHPDKNLVMKTLADVYPKNTPKISSDFSEVQANG 238

Query: 239 VNKWLYTSPILG---GDWFIIAVIDESIAMQSINKMKYELIFYSAIGLVFGGLILVFILR 295
            +  +  + I G    +W++   +D+  A   ++K +   +  + I +V    +L  ++R
Sbjct: 239 KDNIVTFTQIKGLPSVNWYLGVSVDKDEAYAMLSKFRTSAVIATVIAVVIIIALLGMLIR 298

Query: 296 RLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLGSQIRQLKTIA 355
            L+ PL  +  A++DIA G GDLT++L      EF  L   FNSF E + + IR++ +  
Sbjct: 299 VLLQPLHLMTRAMQDIADGEGDLTRRLAIQNHDEFGTLGDAFNSFVERIHTSIREVSSAT 358

Query: 356 SGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQVAADAAKEGE 415
             V + A +  + +  S +  ++Q      +A A+NE+   A E+A +A  A++ A +  
Sbjct: 359 EQVNEVALRVVSASNSSMVNSDEQANRTNSVAAAINELGAAAQEIARNAAQASNQASDAR 418

Query: 416 SASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVINDIADQTNLLAL 475
             + +G  VV     A+ +LS  I +S  +++ L   T  I  +L+VI  I+ QTNLLAL
Sbjct: 419 QLAEDGQQVVERNIKAMTQLSAMISASSSNIEALNSKTVNIGQILEVITSISQQTNLLAL 478

Query: 476 NAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKNVSRSMDESKL 535
           NAAIEAARAGE+GRGFAVVADEVR LA RTQ+S  Q+  +IE+LQ GA++   +M ES+ 
Sbjct: 479 NAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQTMIEELQVGARDSVSTMGESQR 538

Query: 536 ETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNNTVNIKDLS-- 593
            +   VE  N   E+++ V Q I  I  MN  +A+A EEQ+ V E IN +   I  L+  
Sbjct: 539 HSHDSVEIANLAGERLNSVTQRIGEIDGMNQSVATATEEQTSVVESINMDITEINTLNQE 598

Query: 594 -IKLSEAASNAGTEMNAQVSKVKEQNELLNEFKI 626
            ++  ++   A  ++  Q S++K   +L+  F+I
Sbjct: 599 GVENLQSTLRACADLERQASRLK---QLVGSFRI 629