Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., Methyl-accepting chemotaxis protein McpU from Pseudomonas sp. DMC3

 Score =  255 bits (652), Expect = 4e-72
 Identities = 153/388 (39%), Positives = 239/388 (61%), Gaps = 11/388 (2%)

Query: 250 GGDWFIIAVIDESIAMQSINKMKYEL--------IFYSAIGLVFG--GLILVFILRRLMS 299
           G  W ++  + E + +     +K +L        +   ++GL+    GL+LV+++ R ++
Sbjct: 328 GPAWGVLLDVPEKVLVSRAEALKQQLDASNTSGTLIELSLGLLAALIGLLLVWLMARSVT 387

Query: 300 -PLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLGSQIRQLKTIASGV 358
            P+  +   ++DIASG GDLT++L  +   E  +LA  FN F + L   I ++K      
Sbjct: 388 KPILGVAHMLEDIASGEGDLTRRLAYDKHDELGQLAGWFNKFLDKLQPIIAEVKRSVQDA 447

Query: 359 LDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQVAADAAKEGESAS 418
            + A++++  A  +   +EQQ ++++Q+ATA +EM+ TA +VA SA  AA+AAK+ + A+
Sbjct: 448 RNTADQSSAIATQTSAGMEQQYRQVDQVATASHEMSATAQDVARSAAQAAEAAKDADRAT 507

Query: 419 LEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVINDIADQTNLLALNAA 478
            +G +V+  TT +I  L+  + +++  V+ L   +++I TVL+ I  IA+QTNLLALNAA
Sbjct: 508 RQGLTVIDRTTASIDTLAADMSAAMVQVEGLAANSEKIGTVLETIRAIAEQTNLLALNAA 567

Query: 479 IEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKNVSRSMDESKLETD 538
           IEAARAGE+GRGFAVVADEVR LA+RTQ+S  +  ++IEQLQ G + V  SM  S  +  
Sbjct: 568 IEAARAGEAGRGFAVVADEVRNLARRTQESVEETRQVIEQLQNGTQEVVGSMGNSHRQAQ 627

Query: 539 IVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNNTVNIKDLSIKLSE 598
             VE+  Q    +  +  A+  ISDMNLQIASAAEEQS VAEEINNN   I+D++  LS 
Sbjct: 628 GSVEQVGQAVTALRQIGDAVTVISDMNLQIASAAEEQSAVAEEINNNVATIRDVTESLSG 687

Query: 599 AASNAGTEMNAQVSKVKEQNELLNEFKI 626
            A+ +     +  S   +Q  L+++F++
Sbjct: 688 QANESARVSQSLNSLANQQQRLMDQFRV 715