Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  244 bits (624), Expect = 7e-69
 Identities = 172/564 (30%), Positives = 279/564 (49%), Gaps = 32/564 (5%)

Query: 92  IKKAFLS---TGFGFDSNGKV---IENDPNWEPEDDYDPRSRGWYQEAKKNKRIFITEPY 145
           IK AF     TG  F   G+V           P   Y    R W+  A +  ++++T P 
Sbjct: 113 IKSAFFGSAKTGEYFYEEGRVGVDTSGPDAGNPNAGYFATKRPWFTTAVEKGKLYVTPPA 172

Query: 146 LDTEGKNFLVSISSPVADTMNNFIGAMYFDVDLSRIQKNVDDINLFEAGYVFITSNTGKV 205
           +D++  +    + +P+       +G    D+ +S + K +D I   E G  F+      +
Sbjct: 173 VDSQDGSVSAVVQTPIYKN-GALLGVGGVDILISTVGKVIDAIRYEEQGTAFLLDENQNI 231

Query: 206 II---HSNTDELGKNVK------DIYNGFRLDKGKVVLSVNGVNKWLY------------ 244
           +     S    L  +++      D   GF      +  + +G+    +            
Sbjct: 232 VYFPKQSKALPLSSSIRNFDSVFDSTEGFGKLASNIAANESGIVHVTWKGEDYVAVFEHA 291

Query: 245 --TSPILGGDWFIIAVIDESIAMQSINKMKYELIFYSAIGLVFGGLILVFILRRLMSPLK 302
             T+P +  +W +  +I  SI    IN      I  + + +    LI  F   ++  PL 
Sbjct: 292 QLTNPQM--NWSLGILIPASIIDSPINNAITTAIIVAFVIIGLIALITYFASAKVTQPLV 349

Query: 303 TLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTEMLGSQIRQLKTIASGVLDGA 362
            + +A+ +IA G GDLTK+L+   + E   LA+ FN+FT+ L S ++        V D A
Sbjct: 350 EMRNAMAEIAHGDGDLTKRLEVKSNDEIGALAIEFNTFTDKLRSLLKDTAANTKAVSDAA 409

Query: 363 EKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVANSAQVAADAAKEGESASLEGS 422
           +   + +  +   + Q+  +++ ++TA+ +MA T  E++ +A  ++DAA + +     GS
Sbjct: 410 DHLRDVSHATSKEINQERSQVDNVSTAVTQMAATVVEISKNAAQSSDAATKADELVQAGS 469

Query: 423 SVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDVINDIADQTNLLALNAAIEAA 482
             V +    I+ L+  I   VE V  L K +D I  V+DVIN IA+QTNLLALNAAIEAA
Sbjct: 470 EQVQDAMREIRALADAISQGVEVVGGLSKESDSIGAVVDVINSIAEQTNLLALNAAIEAA 529

Query: 483 RAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEGAKNVSRSMDESKLETDIVVE 542
           RAGE GRGFAVVADEVR+LA RTQ+ST  I +++E+LQ  ++  +  M E +  +   V+
Sbjct: 530 RAGEQGRGFAVVADEVRSLASRTQESTTDIRKMVERLQAMSEQTNSVMQEGQTRSQSGVD 589

Query: 543 KTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEINNNTVNIKDLSIKLSEAASN 602
           KT +V E +  + Q+I  + + +  IA A E+Q+ VA++IN + V I  LS K S+ A  
Sbjct: 590 KTEKVVETLKDITQSIGLVHEQSTHIALATEQQTEVAQDINKSLVAITGLSDKTSQHAEE 649

Query: 603 AGTEMNAQVSKVKEQNELLNEFKI 626
              E     +   +  EL+ +FKI
Sbjct: 650 LAVEATQLSAVSGDLKELVGQFKI 673