Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  224 bits (570), Expect = 1e-62
 Identities = 143/463 (30%), Positives = 243/463 (52%), Gaps = 25/463 (5%)

Query: 178 LSRIQKNVDD-------INLFEAGYVFITSNTGKVIIHSNTDELGK----NVKDIY-NGF 225
           +S + K+VD+       + + + G+VF+    G +I H NT+ LGK    ++ D   +G 
Sbjct: 173 MSGVAKSVDELLDIINAVKIAQTGFVFLVDGNGTIIAHPNTELLGKAKLASISDSSTSGQ 232

Query: 226 RLDKGKVVLSVN---GVNKWLYTSPILGGDWFIIAVIDESIAMQSINKMKYELIFYSAIG 282
            L++    ++ +   G  +   ++ +    W+++A + E     S+N    ++I ++ + 
Sbjct: 233 LLNRQGFAMATSDAAGDTQLFASTYVEKAGWYVVAQVPEHELYASLNAGSRQIIIWALVI 292

Query: 283 LVFGGLILVFILRRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFTE 342
                LI +++   L  PL++L    + +  G GDL  ++     KE + L  GFN+F +
Sbjct: 293 AGAFALIGIWLAGTLTKPLESLADVFQQLGRGQGDLRSRIPMPEQKEIARLVEGFNNFID 352

Query: 343 MLGSQIRQLKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVAN 402
            L   I Q+   +  +   A+  A ++  +    + Q  +  Q A A+ EM  T +EVA 
Sbjct: 353 HLHGTISQVAKTSHALKASAQDVAKQSHQTENSTKSQRDQTLQAAAALTEMGSTVNEVAQ 412

Query: 403 SAQVAADAAKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLDV 462
           SA  AA  A    + S  G  +      AI  LS +I      ++ L + T  I  +LD 
Sbjct: 413 SATHAAQNANMATTNSAHGREITQRAVHAINGLSGQIQDVSRVIQSLDEHTAAIGGILDT 472

Query: 463 INDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQEG 522
           I  I++QTNLLALNAAIEAARAG+ GRGF+VVADEVRTLAQR  Q+T +I   I++ Q+ 
Sbjct: 473 IRGISEQTNLLALNAAIEAARAGDHGRGFSVVADEVRTLAQRAAQATDEIQVKIDKFQQD 532

Query: 523 AKNVSRSMDESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEEI 582
           +K+    M+ S+  T  VV  TN++++ +  + + I  I+D+N Q+A+A EEQ+ V E+I
Sbjct: 533 SKSAVSQMESSRARTTDVVTATNEIDKLLQDIAEEIAHINDVNTQVATATEEQATVVEDI 592

Query: 583 NNN----------TVNIKDLSIKLSEAASNAGTEMNAQVSKVK 615
           + N          T+N   + + +S+       E++++VS+ K
Sbjct: 593 SRNINDISASSEETLNATKILVSVSDKLDELAQELSSEVSRFK 635