Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  228 bits (581), Expect = 5e-64
 Identities = 137/348 (39%), Positives = 207/348 (59%), Gaps = 1/348 (0%)

Query: 178 LMSILFLTLLVGSITTLGIT-YLLVPMKRLIQSYCKDSDNPLSQVLYTGRSDEFGQLEFA 236
           L+    L L+ G +    IT  +++P+ + +Q   + +   LS  L + R DE GQL+ A
Sbjct: 289 LLLATVLALIFGLVAAWAITRQIVIPLNQTLQVAQRVASGDLSHNLTSMRQDELGQLQRA 348

Query: 237 LRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMAAS 296
           ++        +IG I D   Q+   A  L    E+++   + Q+ ET+QVATA+NEMAA+
Sbjct: 349 MQSMTVGLRELIGGISDGVTQIASAAEQLSAVTEQTSAGVNSQKVETDQVATAMNEMAAT 408

Query: 297 IQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHSNDI 356
           +QEVA  A+ A+ ++ +A+ +   G ++V +A   I  L  EV  +   + +L+  S+ I
Sbjct: 409 VQEVARNAEEASEAAVAADQQAREGDKVVGEAIAQIERLATEVGNSTVAMGDLKRESDKI 468

Query: 357 SKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQRMI 416
             VL+VI+S+A QTNLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQ+ST +I+ +I
Sbjct: 469 GSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEELI 528

Query: 417 DTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQQS 476
             LQ   +    +M++S      SVE  ++A  AL  I + VS I  M+ Q+ATA +QQS
Sbjct: 529 VGLQSGTQQVATIMDNSRGLTDSSVELPRRAGSALASITRTVSTIQAMNSQIATAAEQQS 588

Query: 477 AVSDEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELAQQF 524
           AV++EIN S+ N+R  ++      +  A  +  +A L  +L  L  +F
Sbjct: 589 AVAEEINRSVLNVRDVSEQTAAASEETAASSTELARLGTHLQALVGRF 636