Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 635 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  219 bits (559), Expect = 2e-61
 Identities = 131/347 (37%), Positives = 201/347 (57%), Gaps = 8/347 (2%)

Query: 178 LMSILFLTLLVGSITTLGITYLLVPMKRLIQSYCKDSDNPLSQVLYTGRSDEFGQLEFAL 237
           L+ +L   ++ G I T        P+++ +    + ++  LS  + T R DE GQL+ ++
Sbjct: 295 LLGVLAAWVIAGQIVT--------PLRKALSVANRIAEGDLSHEVQTRRKDELGQLQHSM 346

Query: 238 RMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMAASI 297
                    +IG I D + Q+   A +L    E++    S Q+ ETEQVA A+N+M A+ 
Sbjct: 347 TQMTLNLRGLIGNISDNAQQIASAAEELSTITEQTRAGVSNQREETEQVAAAMNQMLATA 406

Query: 298 QEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHSNDIS 357
           QEVA  A+ A+ ++  ANH+T  G Q+V+     I  L HE++++ Q +  L+  S  I 
Sbjct: 407 QEVARHAEQASIAAGQANHQTDLGDQVVTDVVAQIEHLAHEMARSSQAMLALQRESQKIG 466

Query: 358 KVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQRMID 417
            VL+VI+S++ QTNLLALNAAIEAARAGE+G+GFAVVADEVR LA RTQQS  +I+ +I 
Sbjct: 467 SVLDVIKSVSQQTNLLALNAAIEAARAGEAGQGFAVVADEVRSLAQRTQQSAEEIEELIG 526

Query: 418 TLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQQSA 477
            L    +    ++++S      SV  A+ A DAL+ I + V  I  M+ Q+A A ++QSA
Sbjct: 527 GLHSGTQQVADILDYSRTLTDNSVGLARNAGDALSEIARTVLVIQEMNPQIAAAAEEQSA 586

Query: 478 VSDEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELAQQF 524
           V++EIN S+  +R A++      +  A  +  +A L  +L +   QF
Sbjct: 587 VAEEINRSVLKVRDASEQTAAASEQTAAASIELARLGTDLQQCVGQF 633