Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  218 bits (555), Expect = 5e-61
 Identities = 138/368 (37%), Positives = 210/368 (57%), Gaps = 17/368 (4%)

Query: 159 VWGSLFASIAIVSLIYPSALMSILFLTLLVGSITTLGITYLLVPMKRLIQSY--CKDSDN 216
           VW + F  +AI       AL+  L ++L+  SI          P++  + +       ++
Sbjct: 190 VWKASFIGLAI-------ALVMALLVSLIARSIVR--------PLQAAVNAMGNIASGES 234

Query: 217 PLSQVLYTGRSDEFGQLEFALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILT 276
            L++ L T   DE  QL        A+   V+G++   +N L + + +L  N  +++  +
Sbjct: 235 DLTRSLDTHGQDEVTQLSRHFNSFTAKLRQVVGQLQVCANALGQSSQELGSNATQAHDRS 294

Query: 277 SEQQAETEQVATAINEMAASIQEVATGAKHAANSSESANHETISGQQIVSQASQSITELE 336
            +Q  + E VATAINE+   +Q+VA  A+HAA+    A  +   GQ  +  + Q I +L 
Sbjct: 295 QQQSQQMELVATAINEVTYGVQDVAKNAEHAASEMRDAQAQAQQGQVNIDSSLQQIDQLS 354

Query: 337 HEVSQAKQVIHELEEHSNDISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVAD 396
             +SQA +VI  L   S  I  VLEVIRSIADQTNLLALNAAIEAARAGE GRGFAVVAD
Sbjct: 355 GTISQAVEVIRTLSAESTQIGSVLEVIRSIADQTNLLALNAAIEAARAGEQGRGFAVVAD 414

Query: 397 EVRGLAARTQQSTMDIQRMIDTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGK 456
           EVR LA RTQ+ST +IQ MI+ LQG ++ AV V+  S   + +++EQA QA  +LT IG+
Sbjct: 415 EVRLLAQRTQKSTAEIQGMIERLQGHSEAAVKVISDSHSASQMTIEQAGQAGASLTAIGE 474

Query: 457 RVSDITGMSVQMATAVDQQSAVSDEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHN 516
            + ++ G++  +A+A  QQ+ V ++IN +++     + +     + ++  +  + GLS  
Sbjct: 475 SLRNLNGLNASIASATLQQAHVVEDINQNVTEAAGLSHSTALAAEQSSVASAHLRGLSEQ 534

Query: 517 LSELAQQF 524
           L  L +QF
Sbjct: 535 LDGLLRQF 542