Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  205 bits (521), Expect = 4e-57
 Identities = 136/349 (38%), Positives = 203/349 (58%), Gaps = 10/349 (2%)

Query: 178 LMSILFLTLLVGSITTLGITYLLV-PMKRLIQSYCKDSDNPLSQVLYTGRSDEFGQLEFA 236
           ++S + L  L+  I  + IT L+  P+ + +QS  + +   L+Q + T R+DE GQL  A
Sbjct: 191 MISGIVLAFLIAIIIGVLITRLITRPIAQAVQSAQRIAQGDLTQAIITERTDEAGQLLMA 250

Query: 237 LRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMAAS 296
           L   Q    + +  I +AS+QL   A +L    ++S+   + Q  E +Q ATA+N+M A+
Sbjct: 251 LSDMQGGLKSTLVEIANASDQLASAAEELSAVTDESSRGLTRQNDEIQQAATAVNQMTAA 310

Query: 297 IQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHSNDI 356
           + EVA+ A   + +S  A  E   G+Q V QA   ++ +  E++ + Q + +L     +I
Sbjct: 311 VDEVASNAVSTSEASRQATTEAEDGRQQVEQAVSGMSSMVVEINDSTQSVADLAGQVREI 370

Query: 357 SKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQRMI 416
            KV++VIR IADQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ ST+DI++MI
Sbjct: 371 GKVIDVIRGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQISTVDIEKMI 430

Query: 417 DTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQQS 476
             +Q  A  AVA M  S   A  +   AQ A +AL  I   V+ I   ++ +A+A ++Q+
Sbjct: 431 GDVQTGADDAVAAMNKSLTWANNTQTLAQNAGEALQRITASVAKINERNLVIASASEEQA 490

Query: 477 AVSDEINHSISNIR-MAADTNVDNGKINAKCAEGVAGLSHNLSELAQQF 524
            V+ E++ ++ NI+ ++  T     + NA         S +LS LA  F
Sbjct: 491 QVAREVDRNLLNIQDLSTQTAAGAHQTNAS--------SQDLSRLATSF 531