Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  204 bits (519), Expect = 8e-57
 Identities = 132/349 (37%), Positives = 197/349 (56%), Gaps = 2/349 (0%)

Query: 178 LMSILFLTLLVGSITTLGITYLLVPMKRLIQSY--CKDSDNPLSQVLYTGRSDEFGQLEF 235
           + + L +T++V  I +  +++L   + R+ ++       D  L+Q L     DE GQL  
Sbjct: 281 ITTALLITVIVVVIVSWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLAS 340

Query: 236 ALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMAA 295
                 +    ++ ++   S  L + +       E+ +     QQ E   VATAINEMAA
Sbjct: 341 NFNTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAA 400

Query: 296 SIQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHSND 355
           + QE+A  A H A ++  A    + G   V+Q  +SI  L  EV  A +VI ELE H + 
Sbjct: 401 ATQEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQ 460

Query: 356 ISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQRM 415
           IS +L  I++IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR L+ RT  ST +IQ+M
Sbjct: 461 ISTILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQM 520

Query: 416 IDTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQQ 475
           I+TLQ     AV +M+ S + A  SV+ A +A+ +L  I K V  I+ M+ Q+A+A ++Q
Sbjct: 521 IETLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQ 580

Query: 476 SAVSDEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELAQQF 524
           ++V+ EI  +   IR  ++         A+ A  ++ LSH L +  ++F
Sbjct: 581 ASVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRF 629



 Score = 29.3 bits (64), Expect = 5e-04
 Identities = 23/115 (20%), Positives = 47/115 (40%), Gaps = 3/115 (2%)

Query: 232 QLEFALRMAQAETSAVIGRIGDASNQLNKF---ANDLLHNIEKSNILTSEQQAETEQVAT 288
           +++  +   QA T   +G + D+    +     AN+   ++E+ +           Q+A+
Sbjct: 516 EIQQMIETLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIAS 575

Query: 289 AINEMAASIQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAK 343
           A  E A+   E+        + S     E  S  +  ++ S+   ELE E+ + K
Sbjct: 576 AAEEQASVTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFK 630