Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  221 bits (563), Expect = 6e-62
 Identities = 133/349 (38%), Positives = 208/349 (59%), Gaps = 8/349 (2%)

Query: 176 SALMSILFLTLLVGSITTLGITYLLV-PMKRLIQSYCKDSDNPLSQVLYTGRSDEFGQLE 234
           S L S+  L ++VG++    IT  +  P+++ +    + +   LSQV    R DE GQL+
Sbjct: 296 SLLTSVALLAMVVGALAAWLITLQITQPLRQTLAVAARIAKGDLSQVDTVQRRDEMGQLQ 355

Query: 235 FALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMA 294
            ++R        +IG I     QL++ A  L  + E + +  ++Q+ ET+QVATA+N+M+
Sbjct: 356 TSMREMTLSLRDLIGGIDQGVGQLSQAATQLAASSEDTKLRINQQREETDQVATAMNQMS 415

Query: 295 ASIQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHSN 354
           A++QEVA  A+ A+ ++ +A+ +   G Q+VS+A   I +L  ++      +  L   S 
Sbjct: 416 ATVQEVAQNAEQASLAATNADQQAQVGDQVVSEAIGRIEQLAGQMDHCLAAMQHLAGESQ 475

Query: 355 DISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQR 414
            I  +L+VI+S+++QTNLLALNAAIEAARAGE+GRGFAVVADEVRGLA RT  +T +I +
Sbjct: 476 RIGSILDVIKSVSEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTSTATEEIGQ 535

Query: 415 MIDTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQ 474
           +ID+L         +++ S      SVE +++A  AL+ I   VS I GM+ Q+ATA ++
Sbjct: 536 LIDSLHNGTDEVTRLLDSSKSLTEQSVELSRRAGHALSQITDTVSSIQGMNQQIATASEE 595

Query: 475 QSAVSDEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELAQQ 523
           QS V+++IN S+ N+R  +D         +  +E  A  S  L +L QQ
Sbjct: 596 QSVVAEQINRSVINVRDVSDQ-------TSAASEQTAASSGELEQLGQQ 637