Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

 Score =  340 bits (873), Expect = 6e-98
 Identities = 212/531 (39%), Positives = 297/531 (55%), Gaps = 23/531 (4%)

Query: 5   MRKNLPVTGHNIELSSSTNILSTTTPDSHITYVNPDFLKISGFAEEELIGQPHNMVRHPD 64
           MR NLPVT           ++S T   S ITY NP+F  ISG++E ELIG PHN+VRHPD
Sbjct: 1   MRLNLPVTPVEQRFPPHQRLISATDTASLITYCNPEFAAISGYSEAELIGSPHNLVRHPD 60

Query: 65  MPPAAFAHMWSTLKSGRSWMGLVKNRCKNGDHYWVSAFAMPIIKNGKVVEYQSVRTKPEP 124
           MPPA +  MW  LK+G+SWMG+VKNRC+NGD+YWV+A+  PI++ G+VV Y+SVR  P  
Sbjct: 61  MPPAVYELMWRYLKAGKSWMGIVKNRCRNGDYYWVNAYVTPILEGGRVVGYESVRVCPTR 120

Query: 125 SHVQAAEKAYAQLRNGKNIL--PKIRLGFHWKLILLVWGSLFASIAIVSLIYPSALMSIL 182
             V  AE  YA+LRNG+  L  P+        L L + G L A  A  + ++P       
Sbjct: 121 EQVARAEALYARLRNGQAALSAPRRLSLLAQALALPLAGGLLAVGA--NHLWPG------ 172

Query: 183 FLTLLVGSITTLGI-----TYLLVPMKRLIQSYCKDSD----NPLSQVLYTGRSDEFGQL 233
               LVG   TLG+      ++   + R +Q   + ++    +P++ + Y+  S   GQL
Sbjct: 173 ----LVGQGLTLGLFVACGLWVRNALGRQLQQIVQGAEGAFADPIAALTYSDLSGAAGQL 228

Query: 234 EFALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEM 293
           +  L   +A     + R+ D + Q+   A D       +     EQ+AET+  ATA+N+M
Sbjct: 229 QLMLISEEARLKTALTRLSDLAGQMAVAARDAGQLSRSTEAALLEQRAETDLSATAMNQM 288

Query: 294 AASIQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHS 353
           AASI EVA   +  A  + +A+     G Q+   +  +I  L   V+Q  Q +  L   +
Sbjct: 289 AASIGEVANHVQLTAAEAHTAHLLAEQGSQVADASGAAIRNLASTVTQINQAVSHLAGQT 348

Query: 354 NDISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQ 413
             I++   +IR IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA +T+QST+ IQ
Sbjct: 349 GAIAEAAGMIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALADKTRQSTLHIQ 408

Query: 414 RMIDTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVD 473
            +ID L+  A+ AVA+       A   V Q Q+A  AL GI   V  I+ MS QMATA  
Sbjct: 409 AIIDALRSGAEEAVAIASRGIDGAEQGVAQVQEARQALHGIRDAVQRISDMSQQMATASQ 468

Query: 474 QQSAVSDEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELAQQF 524
           QQSAV+++++  I+ +   A  +  +    A     +  +   L  L ++F
Sbjct: 469 QQSAVAEDVSRQINGVAGIAQHSAHSANAAASRGTELEHVCAGLRALVERF 519