Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

 Score =  370 bits (951), Expect = e-107
 Identities = 212/523 (40%), Positives = 306/523 (58%), Gaps = 7/523 (1%)

Query: 5   MRKNLPVTGHNIELSSSTNILSTTTPDSHITYVNPDFLKISGFAEEELIGQPHNMVRHPD 64
           MR N P+T       +   ++STT     ITY N  F++ISGF  EEL G PHN+VRHPD
Sbjct: 1   MRNNQPITQRERTFPAQQRLISTTNAKGVITYCNDAFIEISGFTREELTGAPHNLVRHPD 60

Query: 65  MPPAAFAHMWSTLKSGRSWMGLVKNRCKNGDHYWVSAFAMPIIKNGKVVEYQSVRTKPEP 124
           +PPA FAHMW TLK G+ WMG+VKNRCK+GDHYWV+A+  PI  N +VV ++SVR KP  
Sbjct: 61  VPPAVFAHMWQTLKQGQPWMGIVKNRCKSGDHYWVNAYVTPIFDNNQVVGFESVRVKPTA 120

Query: 125 SHVQAAEKAYAQLRNGKNILPKIRLGFHWKLILLVWGSLFASIAIVSLIYPSALMSILFL 184
             ++ AE  Y ++  GK  +P+      W  +L  W   F  I+ V  +  + L      
Sbjct: 121 EQIRRAEALYQRINQGKPPVPRRD---KWLPVLQDWLP-FILISQVGFLIGNWLGHSWGF 176

Query: 185 TLLVG---SITTLGITYLLVPMKRLIQSYCKDSDNPLSQVLYTGRSDEFGQLEFALRMAQ 241
            L  G    +  LG+++    +KRL++   + + +PL   ++T       +LE A+    
Sbjct: 177 ALAAGLSVPLGLLGLSWQQRGLKRLLRLAEQTTSDPLIAQMFTDSRGVQARLEMAMLSQD 236

Query: 242 AETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMAASIQEVA 301
           A     + R+ D++  L+  A        KS+     Q+ ETEQVA A+N+MAA+ QEVA
Sbjct: 237 ARMKTCLTRLQDSAEHLSDQARQSDALAHKSSTGLERQRVETEQVAAAVNQMAATTQEVA 296

Query: 302 TGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHSNDISKVLE 361
              +  A++++ AN  T  G+QI  +  ++I  L   V +  Q + +L + S++I  V++
Sbjct: 297 NHVQRTADATQEANRLTSQGRQIAGETREAIERLSAAVGETGQTVTQLAKDSDEIGGVVD 356

Query: 362 VIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQRMIDTLQG 421
           VI+ IADQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT +ST  I  +I  LQ 
Sbjct: 357 VIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTAESTGQIHGLIAKLQQ 416

Query: 422 RAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQQSAVSDE 481
            A  AV  ME   +QA   V++  QA +AL GI + V++IT M+ Q+A A ++Q+AV+DE
Sbjct: 417 TASNAVLTMETGHRQAQEGVDRVMQADEALVGISEAVANITDMATQIAAATEEQTAVADE 476

Query: 482 INHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELAQQF 524
           I+ +IS I   AD   +  + +A  +E +   + +   L ++F
Sbjct: 477 ISRNISTIAELADQTAEQAQHSALLSEELTSTAGSQYSLVERF 519