Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., Methyl-accepting chemotaxis protein McpQ from Pseudomonas lactucae CFBP13502

 Score =  224 bits (572), Expect = 6e-63
 Identities = 136/348 (39%), Positives = 206/348 (59%), Gaps = 1/348 (0%)

Query: 178 LMSILFLTLLVGSITTLGIT-YLLVPMKRLIQSYCKDSDNPLSQVLYTGRSDEFGQLEFA 236
           L+    L L+ G +    IT  +++P+ + +Q   + +   LS  L + R DE GQL+ A
Sbjct: 289 LLIATILALIFGLVAAWAITRQIIIPLNQTLQVAERVASGDLSHNLTSLRQDELGQLQRA 348

Query: 237 LRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMAAS 296
           ++        +IG I +   Q+   A  L    E+++   + Q+ ET+QVATA+NEMAA+
Sbjct: 349 MQSMTLGLRELIGGISEGVTQIASAAEQLSAVTEQTSAGVNSQKVETDQVATAMNEMAAT 408

Query: 297 IQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHSNDI 356
           +QEVA  A+ A+ ++ +A+ +   G ++V +A   I  L  EV  +   + +L+  S+ I
Sbjct: 409 VQEVARNAEEASEAAVAADQQAREGDKVVGEAIAQIERLATEVGNSTAAMGDLKRESDKI 468

Query: 357 SKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQRMI 416
             VL+VI+S+A QTNLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQ+ST +I  +I
Sbjct: 469 GSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIAELI 528

Query: 417 DTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQQS 476
             LQ   +    +M++S      SVE  ++A  AL  I + VS I  M+ Q+ATA +QQS
Sbjct: 529 VGLQNGTQQVATIMDNSRGLTDSSVELTRRAGSALENITRTVSTIQAMNSQIATAAEQQS 588

Query: 477 AVSDEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELAQQF 524
           AV++EIN S+ N+R  ++      +  A  +  +A L + L  L  +F
Sbjct: 589 AVAEEINRSVLNVRDVSEQTSAASEETAASSAELARLGNYLQTLVGRF 636



 Score = 26.2 bits (56), Expect = 0.004
 Identities = 13/39 (33%), Positives = 23/39 (58%)

Query: 441 VEQAQQAADALTGIGKRVSDITGMSVQMATAVDQQSAVS 479
           VE  Q A DA+    K+++++TG   +  ++  QQ+ VS
Sbjct: 193 VEAEQPALDAIDNALKKIAELTGQLPEQFSSNLQQAGVS 231