Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 511 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score =  222 bits (566), Expect = 2e-62
 Identities = 137/342 (40%), Positives = 203/342 (59%), Gaps = 1/342 (0%)

Query: 184 LTLLVGSITTLGITYLLV-PMKRLIQSYCKDSDNPLSQVLYTGRSDEFGQLEFALRMAQA 242
           L LLVG +    IT L+V P++ +I+   + +   L+  +   R DE GQL  A++   A
Sbjct: 168 LALLVGLLAAWVITRLIVAPLRSVIRVAQQIAAGDLTAKVEVTRRDEMGQLMLAMQQMAA 227

Query: 243 ETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMAASIQEVAT 302
               ++  +     +L   A  L    E++N+  + Q+ ETEQVATA+N+M A++ +VA 
Sbjct: 228 GLGTIVSGLQAGIERLAGSAQSLSAVTEQTNLEVNSQKEETEQVATAMNQMTATVHDVAR 287

Query: 303 GAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHSNDISKVLEV 362
            A+ AA ++++A+ +  SGQQ+V Q+   I +L    + A   I  L     +I  VLEV
Sbjct: 288 NAEEAALAAQTADDKVESGQQVVRQSMARIEQLADSATSASSSIESLSAEIQNIGTVLEV 347

Query: 363 IRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQRMIDTLQGR 422
           I+S+A+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQQST +I+R++  L+  
Sbjct: 348 IKSVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALARRTQQSTEEIERLVSALRAA 407

Query: 423 AKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQQSAVSDEI 482
           A+ +V  +  S +   L+V  A Q   AL  I   VS I  M+ Q+A A ++QS+V++EI
Sbjct: 408 AQSSVQQIRSSGELVKLAVSDALQTESALGSIAAAVSLIQQMNQQIAAAAEEQSSVAEEI 467

Query: 483 NHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELAQQF 524
           N S++ IR +AD +    + NA  +  +A L   L  +   F
Sbjct: 468 NRSVTQIRASADHSSVAMRGNAASSVELAQLGGELRSMVGHF 509